Ll_transcript_285239

• Id Trinity: TRINITY_DN48896_c1_g2_i4
• Name Transcript: Ll_transcript_285239
• Sequence: AAAACATCATTCATCACACTCACACTGTGAAAAACAGAAGGAGACAGAAACTGCTTCATTTCACTTCACTCTCATTTTCAAACCCAAACCCTAGTTCCCT CTCTCTCTCTCTCTCTCTCTCAACCATGGCATCGATGATGCAACCACAGATCATACTGTTGAAGGAAGGTACTGACACTTCTCAAGGGAAGGCTCAATTG GTCAGCAATATCAACGCCTGCACCGCTGTCGCCGATGTCGTTCGAACCACCCTTGGCCCTCGCGGCATGGACAAGCTCATCCATGATGACAAAGGCTCCG TCACCATCTCCAATGACGGCGCCACCATTATGAAGCTCCTCGATATCGTCCATCCTGCTGCCAAAATCCTTGTTGATATTGCTAAATCTCAGGATTCTGA GGTTGGAGATGGAACCACTACTGTGGTGTTGCTTGCAGCAGAGTTTTTGAAAGAGGCAAAGCCTTTCATTGAAGACGGTGTTCACTCTCAAAATTTGATA AAAAGCTATAGGGCTGCATCCACCTTGGCAATTGGGAAGATTAAGGAGCTTGCTACCAGCATTGAAGGAAAAAGTCTGGACGAAAAGAAAAGCTTGCTCG CCAAGTGTGCTGCCACCACACTTTCCTCAAAGCTCATTGGTGGGGAGAAAGAATTCTTCGCATCAATGGTCGTGGATGCTGTGATTGCAATTGGGTATGA TGACAGGTTGAACATGATTGGAATTAAAAAGGTTCCTGGTGGTACCATGCGGGACTCATTTCTAGTAAATGGTGTTGCCTTCAAAAAGACATTTTCATAT GCTGGGTTTGAGCAACAACCCAAGAAGTTTCTCAATCCAAAAATACTATTACTAAACATTGAGTTGGAGCTAAAATCTGAGAAAGAAAATGCTGAAATAA GATTATCAGATCCATCTCAATATCAATCAATTGTTGACGCAGAATGGAATATTATTTATGACAAGTTGGATAAATGTGTCAACAGTGGTGCCAAAGTTGT TCTTTCACGGCTGGCTATTGGAGATCTAGCTACTCAGTATTTTGCAGACCGAGACATTTTCTGTGCTGGCCGTGTAGCCGAAGAAGATTTAAAAAGGGTT GCTGCTGCAACAGGTGGAACTGTACAAACATCTGTCAATAATGTTATTGATGAGGTTCTTGGAACTTGTGAGGTTTTTGAGGAAAAGCAAGTTGGAAATG AGAGATTTAATTTATTCAGTGGATGTCCATCTGGCCAAACAGCCACCATAGTTCTTCGTGGTGGAGCTGATCAGTTCATTGAGGAAGCTGAGCGAAGTTT GCATGATGCAATCATGATTGTTAGAAGGGCTTTGAAGAATTCAACTGTTGTTGCCGGTGGAGGTGCTATAGATATGGAGATAAGCCGTTATCTAAGGCAG CATGCACGTACAATAGCGGGAAAGTCTCAGCTTTTTATTAACTCCTATGCAAAAGCTCTTGAGGTTATTCCTCGGCAATTATGTGATAATGCTGGATTTG ATGCCACTGATGTGCTGAACAAACTAAGGCAGAAACATGCACTTCCTTCTGGCGAAGGGGCACCATATGGGGTGGACATAGCTACTGGTGGGATTGCTGA CTCATTTGCTAACTTTGTTTGGGAGCCTGCAGTTGTGAAGATCAATGCTATAAATGCTGCTACAGAAGCAGCTTGCCTTATCCTAAGCGTGGATGAGACA GTTAAAAATCCCAAGTCTGAAAGTGCACAAGGAGATGCTGCTGCCAGTGCCATGGGCGGCAGAGGTCGAGGTGGTTTCCGTGGTCGTGGTCGGGGAATGC GAAGATGATGAAAATCCATTATGACAGATTAGCATTTGTTCAGTGCAGTGGTGAATACATGCAAGGCCAGTGCATGCATTATTCTGCTAGTCGGTGTTGC TAGAAGCATGCCATATTTTGGATATACAGAAGATGGTGTTATGAAATTGTAATGGTGAGGATTCTGGGAACATCGGAAGGATTTGATAATATTAACTTTG AAGCATGTATTTCTGACCTTTGGGTTTTTTATACTACGCTTGAGGGGTTTAAGGTTTAAACTATTGGCTTTTACTTATTTTGATTGATGGCTAGTGTGTG AATTTTTGCATTTCCCTGTTTTACTGCTCACTGTAAAAACAGGCATGGAATTTCTGTTTCGCCTTCCATAAATTTTGTATCACTTTTTGACCATTTCGTA TTTCACGAGTATGCCATTATTTTGCTTAAAAGAAATATGTTTGTACTAGAGAAAGAGAAGTCATTTGTGAAGGTTAAGACTTAAGAGAACGTGTGATTCA AGGGAGGTGC
• Tissue: pods
• Gene name: LI_gene_164883;
• Additional information: details;

Expression of Ll_transcript_285239

FPKM

• PAB: 6.9
• PNAB: 56.1
• PS1: 42.9
• PS2: 30.7
• PS3: 37.3
• PW1: 32.7
• PW2: 28.4
• PW3: 24

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_285239

• Blastp: T-complex protein 1 subunit eta from Arabidopsis with 94.04% of identity
• Blastx: T-complex protein 1 subunit eta from Arabidopsis with 94.04% of identity
• Eggnog: Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions (By similarity)(COG0459)
• Kegg: Link to kegg annotations (AT3G11830)
• CantataDB: Link to cantataDB annotations (CNT0001639)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461597.1)
• Pfam: TCP-1/cpn60 chaperonin family (PF00118.23)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;