Id Trinity | TRINITY_DN48898_c4_g2_i3 |
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Name Transcript | Ll_transcript_286765 |
Sequence | TGATCTGAATATTTTCTGTTAATCATGAGTCACTAGCTTTTGCGCCTGCAATTTAGTTCTGCTTGTATTCCTAGGCGATTGACATGAGACTTTTACCGGA TTTCTTCTCAAAATGCTTGATCTATCTAAGAATGTGAGAGCAGGACCTCATTACATTTGGTAATTTACAGGACCTCATTACAAGTGGAAGAAAAATAACA TGATTGTCGTATGTTTCACCAATAGAATGACAATCAATATGTTTGGTGCGCATGAGGTAGTCCCACACCGCCTTGAGCGTCGTAAAAGAATGTAAATTAT TGACCGAATGCATGAAATAATTTGAGCATCCTTTGTCTCCTACACATGGATTTAGTAGAAGTGGCATCAACATAGCCCCACAAACCTTCCCCTTCACAAA CATCTTGAACTGAAAGTAGTTATTCCCATTAAAATGAACACAAAATCTCTTGTTTACCATTGGGGAAAATGGGAATTCCAAGAATCCAAAGCTGAGAGCC AAAAACCTAAGAGAACAAAAAACCAGGAAACTAAGAGCCAATTTGTGCCTTAGAACCTAGAAACCGATAACCAACTGGTGGCTAGAGCCAAGAACTCACT AATGCTTGAAAGTTGCTCTGATATCATGTCAAAGTATTGGATTAATTGCGCCAATGTTCTTCCACCCACCTGATCTACTATTTATATACACTTTAAGGAA TAAATACAAGTTACATTTACAATGTGATTGTTGGAAGTCCCACATCACCTGCTCCACATTGCTACTCCCTAAATGCATGAATGGCATTTTCCTGGATACA TGAATAACTTTTTACATGAATCTGAATGTCAAATTCCACAGCTTCCAGTACTTCTAATTCCAACAACACAATTAAGGGGTTGTCAATTCCTAGGCTAACA ATATGCATATAGGAAAGCCATAGAAAGTAACCGGTACCTGCTTTGCTGTGTGATTGTTATTTGCAGTCCTAAATGTGAATTGTTTTTGGGCTGTGACTGA TTACTTATGTGGCCGTAGATGCTCTGCTGTTGTAGAAGGCATCATTTCGGATTATCAGAAGGAAAGAAGAGGTTCACGTATTGATGAAAGTGACAGTGAA GGAGCTAAGATTTATAAAATGCTGGAAGCAGCTGAAGAACCTGAGTTCCTAATGGCAGATATGAGTCCAGAGCAGCTTAGTTCTTTTTCTGCATATAAGG CCAAATTAAATGCAATCAAACATTCTGAAATGGAAAAAACAATTGAGAAAGCTTTGAAAGATGCTGGCTTAAGAAACAGAGAAGTCACACCATTTATGAG GTTGCGGGTTGTTGGATTAACTCACAAAACTCGACAAGACCGGCCGAAAGAGGGCATAGTAACAATTTGGAACCCAACAGAGAAGCAGCGGCAGGAGTTG GTAGAGGGAGAAGCATATGTAATCGCAGGTCTCATACCATCAGGTGTTGATTTAGACATCCTTCACTTGCAGACTAGAGGATCTTCCACCCAGTGGTTGC CTTTATCTTCTGATGCAAAAGAACAGTTTAAGCCTTTTTTCAGTAATCGAAAATCGTTCTCAATGTCAAGCTTGAGTGACATCCCTCTTTCCAGTGAGTT TGATATTGCTGCACATGTTGTGCATGTGGGAGAGGTTTATTTGTCAAGTCAGCAAAAAAAACAATGGGTTTTCGTGACTGATGGATCCATTATGCATGGT TTACAATCAGAAACAATCTCTTTGCTTGCCATTTGCTTTTGCTCTCCATCAATTGATTATGATTCATTACCATTGATTAACTATAATCTTGCTGGATCTA CGGTAATTACAATGTCTTGTATTTTCTTTTACTTATATTTTTGGCCTGTATATCCACTATGGATTATGATTTATTTCAATCAAGTAACTGTAAACTTGTT ATGATTTTCGTTTATCCTTTATCAATAGCTTTTACTGCTCTGTCCTTCATACTTTCCGGACAAAATAAAAATGGCACCTTATAAGTCTGTGCATATATCA GTATATATTTCAGATTAGGTTTTAGGTAAATGCTATTGACACTCAATATTATCATGCATGCTCACTAGAAACCAATCACAAGTTTGTTTTTTTATTTACG AAGGTGAATATCGGTTAATGAGAAATATGAACAGACATTTGAGACTGCCAATAGTCGCACCCGTGGTTTCGTTTTTATTACTACAAGTCTACAAATATAT AGTCTGTGAAGTCTTTATGTTGTCTAGTGTGTGAAACATGATTAATGTTGCATTATGTTACAAGTTAGATTAGTCTTATATTTTCATTATATGTAGGTTG GTTTCTGTAATCTTATTA BLAST |
Tissue | pods |
Gene name | LI_gene_164901; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_286765
Blastp | Protein BREAST CANCER SUSCEPTIBILITY 2 homolog B from Arabidopsis with 56.71% of identity |
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Blastx | Protein BREAST CANCER SUSCEPTIBILITY 2 homolog B from Arabidopsis with 54.98% of identity |
Eggnog | Breast cancer 2, early onset(ENOG410Y06W) |
Kegg | Link to kegg annotations (AT5G01630) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019438736.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |