Ll_transcript_286766

• Id Trinity: TRINITY_DN48898_c4_g2_i4
• Name Transcript: Ll_transcript_286766
• Sequence: GAAACATGGCTATGGCGGAAAAGAAAGAAATAGCAAAACCCTAATTTGTTGAGAAGAGAAGAATGAGGAAATGGAAGATAATCTCCGACGCCGATAACAA CAATTACCACTGGCACAACACTCACCACCACCACGATGATGATGAACAACAATCACCATTCAATTCCATTTCTACTGATTCTACTCCTCTTCTTCCTTCA ATGTCTGATCTTCTTCTTCAAGCATGTTCTTCTTCAATTCAACACCAACAACAACAACAAGAACATCAACCTATTGTCATGTTTCGAACCGCTCTCGGAA AACCGGTTCAACCGGCTCAGTCTTCACTCGCCAAGGCTTTACTTCTACTTGGCGAAGATGCGAACGCTAATGCTAATTCAGCCGCTCAAGGTGAAGAACA CCACATAGATAATATTTGCAGTTTCTCCAATTCTCTTTTTAAGACAGGCTCTGGAAAAAGTGTTACTATATCTCCTAATGGTCTGGTTAGAGCAAAGACT TTACTGGGATTGGAAGAACATGCTGATGGTAGTAATACTCAAACCCTTCAGCATGCAAAAAAATGGCATACTGTCGGTGAAACATATGAAAGGCGGAACT CACCTCATTTTCAGCTACATAAATCTGTTAACAGTAATAGGGCGATGAATGCTGCATCATGTCAAAATCATTCACTTGGTAGTAGTCATACATCAAAGAA TGACTTCGAAAAAGAAGTTGGTCAACCAAGTATGTGTACTTCTGGTGGTAAACAACCTCCAATTAAGTTCCACACTGCAGGTGGAAGGTCTATATCTGTT TCTAATGATGCACTGCAACGTGCTAGAAGCCTTCTTGGTGACCCAGACCTTGGAGATTTCTTTGATGGAGGGGATGCCGGTGACTCAATGTTCTCTTTAC CAAATCAGAAACAAACCAACACTAGTTCATCTTGTGACAGAAGTGATTATGATACTCCTTTGGTTGATCAAGTAACACTAGAGAGCAATCTTATGACAAA ATGTTTCACATCACCCTTGTCATCTTATAGACAAAAGGACACCAAGTTCCTTCATGAAGGAACTGCAAATAACTTAATCAAAAAATTTGATGCTGTTGGG AGTGAAAATAATCACAGCCTGAAAAGTAGCATCGCCTCTGGACGGAAACCCCTACATGACATAAACCAAGTAACAGACTCAACTGCATATCATTCTTCGT TGAATGGGTTTTCTTCAAAAGTAGATCCACTTAGAATGTTATCAGGAAGGTCATTGGCTGATATTTCCAATACCATTAACACTGTGCATACAAACAATAG ACAACAACCTGCTAGTGGAAAACGAAGACTAGGACCACATGCAATGGTTTCTCCCTTTAAAAAGCCTCGTGGCTGCAATTCTTCCATCCATTCTGACAAC AACGTTGGAGTTTTTTCTAATGGTTTTTCTCAATTTTCTGGGGATGCTTCCGTAAGCAAAATAAAGGTTTCTACCTTGTATCCATTTCAGCACCCAAGGA TGCACATGAAACATTTTTTTGCAGTGCCTTCATTAGATCAAAAAGTGCAATTTCCAAACCTGGTCAGACAGATGACATCAGGTAATGCAGAAAAATATGT GTTCCATGAGGGGTCTGGTGAAGGTGGTATCGGAGCAGAGGCTTTTGTCAATCTTTTGGTACAGCATGGTGCTTCCACACATTTTGCTTCTAAAGAGTGG GTCTTGAATCATTACAAATGGATTGTTTGGAAGCTGGCATGCTATGTGAGATGCTGTTCAGCTAGGTCTGCTGGAAATTTTTTGACTATATCAAATGTAC TTGAGGAACTGAAGTACAGATATGAAAGAGAAGTGAACCATGGTCACCGATCGACCCTAAAGAAAATTCTTGAAGGGGATGCATTACCTTCTTCAATGAT GGTTCTATGCATTTCTAGCATTCACTCTAATCATGGACTGGAAAATGGGACTTCTTCTGAGACAGAGACTGGGACTCAGAGCAGTGAGTCAGTAATAGTC GAACTAACTGATGGATGGTAACGTTTTTGACTTCATGCTGTCTGATTTTAAAATATATATGGTTCCTTACCCTGACATGTTGAACGGTTTCCCTTGCAGG TATTCTATGAATGCCATGTTAGATGTTCCGTTGTCAGAGCAACTAGCTTCTGGAAAATTGTTTGTAGGACAGAAGCTTCGGATCTGGGGAGCAGGATTAT GTGGCTGGCATGGGCCAGTTTCACCCCTTGAGGTGTCATCAGCAGTTAGTTTAATGCTGCACATAAATGGAACATATAGAGCTCATTGGGCAGACCGGTT AGGATTTTGTAAGGTAGCTGGTCCACCTTTGGCCTTCAGATGCATAAAAGGCAATGGTGGTCTAATCCCTCAAACTTTGGCTGGAGTTACTCGCATATAT CCTATTCTTTACAAGGAAAGGTTAAGCTGTGGAAGGTCTGTTGTCATATCAGAGAGAATGGAGGATAAAATGACGGAGCTATATAATCAGAGATGCTCTG CTGTTGTAGAAGGCATCATTTCGGATTATCAGAAGGAAAGAAGAGGTTCACGTATTGATGAAAGTGACAGTGAAGGAGCTAAGATTTATAAAATGCTGGA AGCAGCTGAAGAACCTGAGTTCCTAATGGCAGATATGAGTCCAGAGCAGCTTAGTTCTTTTTCTGCATATAAGGCCAAATTAAATGCAATCAAACATTCT GAAATGGAAAAAACAATTGAGAAAGCTTTGAAAGATGCTGGCTTAAGAAACAGAGAAGTCACACCATTTATGAGGTTGCGGGTTGTTGGATTAACTCACA AAACTCGACAAGACCGGCCGAAAGAGGGCATAGTAACAATTTGGAACCCAACAGAGAAGCAGCGGCAGGAGTTGGTAGAGGGAGAAGCATATGTAATCGC AGGTCTCATACCATCAGGTGTTGATTTAGACATCCTTCACTTGCAGACTAGAGGATCTTCCACCCAGTGGTTGCCTTTATCTTCTGATGCAAAAGAACAG TTTAAGCCTTTTTTCAGTAATCGAAAATCGTTCTCAATGTCAAGCTTGAGTGACATCCCTCTTTCCAGTGAGTTTGATATTGCTGCACATGTTGTGCATG TGGGAGAGGTTTATTTGTCAAGTCAGCAAAAAAAACAATGGGTTTTCGTGACTGATGGATCCATTATGCATGGTTTACAATCAGAAACAATCTCTTTGCT TGCCATTTGCTTTTGCTCTCCATCAATTGATTATGATTCATTACCATTGATTAACTATAATCTTGCTGGATCTACGGTTGGTTTCTGTAATCTTATTAAA AGAGAAAAGGACAAAACAAACCATATCTGGGTTGCTGATGCTACCGAAAACTCGACCTATTGTTTGAGTTACGATTCCCTGCACCATGCTCACCTCAGAA ACACCGCCAGCTCCATCAGAAGATGGGCAAACAACTCTAGCTTGACAATAGAGAAACTCAAGGAAAAAGTGTTGTCTATGGTTGGTGATTGTAAAGGATA ACTAAGATGGGCCTAAATTGCTATTTTGCCATTGGTCTTGATTTGCATATGGAAGGGTATTCACTTAACCCATGCTCTTACCATTAATGTCATATTAAGG TAATGGTTTTAAATCTCTTAATTTAATGAAGAGATATAGTTAGTTATACTTTCTTACATTAACTCAGTATAGTCATAGCAAAATGTGATTGTACCCAATT ATGATATTTTTTGCTTTGTAATATAATCACAATGGAATGAATTGATGAGTGATCTATGACAAAATTTGAAGGTTATATCTGAAAAATTAAAGCTTGTAGT GGATTGATTGAGCAAGCAAAATGCTAACCCACACATTCTTGGCCTAACATTATGACAGTTTTGTTGATTTGTCCTAACTTAACAAATAAAATAATACTAT CTGTGTAAAGATTTATACATAGTTACTATATCATTTGTATTACTTTTATTTAAGAGTCAATAGTTATTAAAAATGAATGTTGG
• Tissue: pods
• Gene name: LI_gene_164901;
• Additional information: details;

Expression of Ll_transcript_286766

FPKM

• PAB: 0.3
• PNAB: 0.3
• PS1: 0.1
• PS2: 0.3
• PS3: 0.6
• PW1: 0
• PW2: 0.1
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_286766

• Blastp: Protein BREAST CANCER SUSCEPTIBILITY 2 homolog B from Arabidopsis with 35.97% of identity
• Blastx: Protein BREAST CANCER SUSCEPTIBILITY 2 homolog B from Arabidopsis with 57.51% of identity
• Eggnog: Breast cancer 2, early onset(ENOG410Y06W)
• Kegg: Link to kegg annotations (AT5G01630)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019438738.1)
• Pfam: BRCA2 repeat (PF00634.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;