| Id Trinity | TRINITY_DN48898_c4_g2_i6 |
|---|---|
| Name Transcript | Ll_transcript_286769 |
| Sequence | GAAACATGGCTATGGCGGAAAAGAAAGAAATAGCAAAACCCTAATTTGTTGAGAAGAGAAGAATGAGGAAATGGAAGATAATCTCCGACGCCGATAACAA CAATTACCACTGGCACAACACTCACCACCACCACGATGATGATGAACAACAATCACCATTCAATTCCATTTCTACTGATTCTACTCCTCTTCTTCCTTCA ATGTCTGATCTTCTTCTTCAAGCATGTTCTTCTTCAATTCAACACCAACAACAACAACAAGAACATCAACCTATTGTCATGTTTCGAACCGCTCTCGGAA AACCGGTTCAACCGGCTCAGTCTTCACTCGCCAAGGCTTTACTTCTACTTGGCGAAGATGCGAACGCTAATGCTAATTCAGCCGCTCAAGGTGAAGAACA CCACATAGATAATATTTGCAGTTTCTCCAATTCTCTTTTTAAGACAGGCTCTGGAAAAAGTGTTACTATATCTCCTAATGGTCTGGTTAGAGCAAAGACT TTACTGGGATTGGAAGAACATGCTGATGGTAGTAATACTCAAACCCTTCAGCATGCAAAAAAATGGCATACTGTCGGTGAAACATATGAAAGGCGGAACT CACCTCATTTTCAGCTACATAAATCTGTTAACAGTAATAGGGCGATGAATGCTGCATCATGTCAAAATCATTCACTTGGTAGTAGTCATACATCAAAGAA TGACTTCGAAAAAGAAGTTGGTCAACCAAGTATGTGTACTTCTGGTGGTAAACAACCTCCAATTAAGTTCCACACTGCAGGTGGAAGGTCTATATCTGTT TCTAATGATGCACTGCAACGTGCTAGAAGCCTTCTTGGTGACCCAGACCTTGGAGATTTCTTTGATGGAGGGGATGCCGGTGACTCAATGTTCTCTTTAC CAAATCAGAAACAAACCAACACTAGTTCATCTTGTGACAGAAGTGATTATGATACTCCTTTGGTTGATCAAGTAACACTAGAGAGCAATCTTATGACAAA ATGTTTCACATCACCCTTGTCATCTTATAGACAAAAGGACACCAAGTTCCTTCATGAAGGAACTGCAAATAACTTAATCAAAAAATTTGATGCTGTTGGG AGTGAAAATAATCACAGCCTGAAAAGTAGCATCGCCTCTGGACGGAAACCCCTACATGACATAAACCAAGTAACAGACTCAACTGCATATCATTCTTCGT TGAATGGGTTTTCTTCAAAAGTAGATCCACTTAGAATGTTATCAGGAAGGTCATTGGCTGATATTTCCAATACCATTAACACTGTGCATACAAACAATAG ACAACAACCTGCTAGTGGAAAACGAAGACTAGGACCACATGCAATGGTTTCTCCCTTTAAAAAGCCTCGTGGCTGCAATTCTTCCATCCATTCTGACAAC AACGTTGGAGTTTTTTCTAATGGTTTTTCTCAATTTTCTGGGGATGCTTCCGTAAGCAAAATAAAGGTTTCTACCTTGTATCCATTTCAGCACCCAAGGA TGCACATGAAACATTTTTTTGCAGTGCCTTCATTAGATCAAAAAGTGCAATTTCCAAACCTGGTCAGACAGATGACATCAGGTAATGCAGAAAAATATGT GTTCCATGAGGGGTCTGGTGAAGGTGGTATCGGAGCAGAGGCTTTTGTCAATCTTTTGGTACAGCATGGTGCTTCCACACATTTTGCTTCTAAAGAGTGG GTCTTGAATCATTACAAATGGATTGTTTGGAAGCTGGCATGCTATGTGAGATGCTGTTCAGCTAGGTCTGCTGGAAATTTTTTGACTATATCAAATGTAC TTGAGGAACTGAAGTACAGATATGAAAGAGAAGTGAACCATGGTCACCGATCGACCCTAAAGAAAATTCTTGAAGGGGATGCATTACCTTCTTCAATGAT GGTTCTATGCATTTCTAGCATTCACTCTAATCATGGACTGGAAAATGGGACTTCTTCTGAGACAGAGACTGGGACTCAGAGCAGTGAGTCAGTAATAGTC GAACTAACTGATGGATGGTATTCTATGAATGCCATGTTAGATGTTCCGTTGTCAGAGCAACTAGCTTCTGGAAAATTGTTTGTAGGACAGAAGCTTCGGA TCTGGGGAGCAGGATTATGTGGCTGGCATGGGCCAGTTTCACCCCTTGAGGTGTCATCAGCAGTTAGTTTAATGCTGCACATAAATGGAACATATAGAGC TCATTGGGCAGACCGGTTAGGATTTTGTAAGGTAGCTGGTCCACCTTTGGCCTTCAGATGCATAAAAGGCAATGGTGGTCTAATCCCTCAAACTTTGGCT GGAGTTACTCGCATATATCCTATTCTTTACAAGGAAAGGTTAAGCTGTGGAAGGTCTGTTGTCATATCAGAGAGAATGGAGGATAAAATGACGGAGCTAT ATAATCAGAGGTGACTTAATCCATTCACCCTATAGAAATCAATGAGACCTACTAGAAGATATTTACCGATCTTTGTCTTCCTTTATTGTCATCTGATCTA AATGTTTCCCTGTTAATCATGAATCATGAGCTTTTGAGCATTTATG BLAST |
| Tissue | pods |
| Gene name | LI_gene_164901; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_286769
| Blastp | Protein BREAST CANCER SUSCEPTIBILITY 2 homolog B from Arabidopsis with 41.15% of identity |
|---|---|
| Blastx | Protein BREAST CANCER SUSCEPTIBILITY 2 homolog B from Arabidopsis with 40.71% of identity |
| Eggnog | Breast cancer 2, early onset(ENOG410Y06W) |
| Kegg | Link to kegg annotations (AT5G01630) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019438738.1) |
| Pfam | BRCA2 repeat (PF00634.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |