Ll_transcript_286772

Id TrinityTRINITY_DN48898_c4_g2_i9
Name TranscriptLl_transcript_286772
SequenceGAAACATGGCTATGGCGGAAAAGAAAGAAATAGCAAAACCCTAATTTGTTGAGAAGAGAAGAATGAGGAAATGGAAGATAATCTCCGACGCCGATAACAA CAATTACCACTGGCACAACACTCACCACCACCACGATGATGATGAACAACAATCACCATTCAATTCCATTTCTACTGATTCTACTCCTCTTCTTCCTTCA ATGTCTGATCTTCTTCTTCAAGCATGTTCTTCTTCAATTCAACACCAACAACAACAACAAGAACATCAACCTATTGTCATGTTTCGAACCGCTCTCGGAA AACCGGTTCAACCGGCTCAGTCTTCACTCGCCAAGGCTTTACTTCTACTTGGCGAAGATGCGAACGCTAATGCTAATTCAGCCGCTCAAGGTGAAGAACA CCACATAGATAATATTTGCAGTTTCTCCAATTCTCTTTTTAAGACAGGCTCTGGAAAAAGTGTTACTATATCTCCTAATGGTCTGGTTAGAGCAAAGACT TTACTGGGATTGGAAGAACATGCTGATGGTAGTAATACTCAAACCCTTCAGCATGCAAAAAAATGGCATACTGTCGGTGAAACATATGAAAGGCGGAACT CACCTCATTTTCAGCTACATAAATCTGTTAACAGTAATAGGGCGATGAATGCTGCATCATGTCAAAATCATTCACTTGGTAGTAGTCATACATCAAAGAA TGACTTCGAAAAAGAAGTTGGTCAACCAAGTATGTGTACTTCTGGTGGTAAACAACCTCCAATTAAGTTCCACACTGCAGGTGGAAGGTCTATATCTGTT TCTAATGATGCACTGCAACGTGCTAGAAGCCTTCTTGGTGACCCAGACCTTGGAGATTTCTTTGATGGAGGGGATGCCGGTGACTCAATGTTCTCTTTAC CAAATCAGAAACAAACCAACACTAGTTCATCTTGTGACAGAAGTGATTATGATACTCCTTTGGTTGATCAAGTAACACTAGAGAGCAATCTTATGACAAA ATGTTTCACATCACCCTTGTCATCTTATAGACAAAAGGACACCAAGTTCCTTCATGAAGGAACTGCAAATAACTTAATCAAAAAATTTGATGCTGTTGGG AGTGAAAATAATCACAGCCTGAAAAGTAGCATCGCCTCTGGACGGAAACCCCTACATGACATAAACCAAGTAACAGACTCAACTGCATATCATTCTTCGT TGAATGGGTTTTCTTCAAAAGTAGATCCACTTAGAATGTTATCAGGAAGGTCATTGGCTGATATTTCCAATACCATTAACACTGTGCATACAAACAATAG ACAACAACCTGCTAGTGGAAAACGAAGACTAGGACCACATGCAATGGTTTCTCCCTTTAAAAAGCCTCGTGGCTGCAATTCTTCCATCCATTCTGACAAC AACGTTGGAGTTTTTTCTAATGGTTTGTGGTCTTCAGGTTTTTCTCAATTTTCTGGGGATGCTTCCGTAAGCAAAATAAAGGTTTCTACCTTGTATCCAT TTCAGCACCCAAGGATGCACATGAAACATTTTTTTGCAGTGCCTTCATTAGATCAAAAAGTGCAATTTCCAAACCTGGTCAGACAGATGACATCAGGTAA TGCAGAAAAATATGTGTTCCATGAGGGGTCTGGTGAAGGTGGTATCGGAGCAGAGGCTTTTGTCAATCTTTTGGTACAGCATGGTGCTTCCACACATTTT GCTTCTAAAGAGTGGGTCTTGAATCATTACAAATGGATTGTTTGGAAGCTGGCATGCTATGTGAGATGCTGTTCAGCTAGGTCTGCTGGAAATTTTTTGA CTATATCAAATGTACTTGAGGAACTGAAGTACAGATATGAAAGAGAAGTGAACCATGGTCACCGATCGACCCTAAAGAAAATTCTTGAAGGGGATGCATT ACCTTCTTCAATGATGGTTCTATGCATTTCTAGCATTCACTCTAATCATGGACTGGAAAATGGGACTTCTTCTGAGACAGAGACTGGGACTCAGAGCAGT GAGTCAGTAATAGTCGAACTAACTGATGGATGGTATTCTATGAATGCCATGTTAGATGTTCCGTTGTCAGAGCAACTAGCTTCTGGAAAATTGTTTGTAG GACAGAAGCTTCGGATCTGGGGAGCAGGATTATGTGGCTGGCATGGGCCAGTTTCACCCCTTGAGGTGTCATCAGCAGTTAGTTTAATGCTGCACATAAA TGGAACATATAGAGCTCATTGGGCAGACCGGTTAGGATTTTGTAAGGTAGCTGGTCCACCTTTGGCCTTCAGATGCATAAAAGGCAATGGTGGTCTAATC CCTCAAACTTTGGCTGGAGTTACTCGCATATATCCTATTCTTTACAAGGAAAGGTTAAGCTGTGGAAGGTCTGTTGTCATATCAGAGAGAATGGAGGATA AAATGACGGAGCTATATAATCAGAGATGCTCTGCTGTTGTAGAAGGCATCATTTCGGATTATCAGAAGGAAAGAAGAGGTTCACGTATTGATGAAAGTGA CAGTGAAGGAGCTAAGATTTATAAAATGCTGGAAGCAGCTGAAGAACCTGAGTTCCTAATGGCAGATATGAGTCCAGAGCAGCTTAGTTCTTTTTCTGCA TATAAGGCCAAATTAAATGCAATCAAACATTCTGAAATGGAAAAAACAATTGAGAAAGCTTTGAAAGATGCTGGCTTAAGAAACAGAGAAGTCACACCAT TTATGAGGTTGCGGGTTGTTGGATTAACTCACAAAACTCGACAAGACCGGCCGAAAGAGGGCATAGTAACAATTTGGAACCCAACAGAGAAGCAGCGGCA GGAGTTGGTAGAGGGAGAAGCATATGTAATCGCAGGTCTCATACCATCAGGTGTTGATTTAGACATCCTTCACTTGCAGACTAGAGGATCTTCCACCCAG TGGTTGCCTTTATCTTCTGATGCAAAAGAACAGTTTAAGCCTTTTTTCAGTAATCGAAAATCGTTCTCAATGTCAAGCTTGAGTGACATCCCTCTTTCCA GTGAGTTTGATATTGCTGCACATGTTGTGCATGTGGGAGAGGTTTATTTGTCAAGTCAGCAAAAAAAACAATGGGTTTTCGTGACTGATGGATCCATTAT GCATGGTTTACAATCAGAAACAATCTCTTTGCTTGCCATTTGCTTTTGCTCTCCATCAATTGATTATGATTCATTACCATTGATTAACTATAATCTTGCT GGATCTACGGTTGGTTTCTGTAATCTTATTAAAAGAGAAAAGGACAAAACAAACCATATCTGGGTTGCTGATGCTACCGAAAACTCGACCTATTGTTTGA GTTACGATTCCCTGCACCATGCTCACCTCAGAAACACCGCCAGCTCCATCAGAAGATGGGCAAACAACTCTAGCTTGACAATAGAGAAACTCAAGGAAAA AGTGTTGTCTATGGTTGGTGATTGTAAAGGATAACTAAGATGGGCCTAAATTGCTATTTTGCCATTGGTCTTGATTTGCATATGGAAGGGTATTCACTTA ACCCATGCTCTTACCATTAATGTCATATTAAGGTAATGGTTTTAAATCTCTTAATTTAATGAAGAGATATAGTTAGTTATACTTTCTTACATTAACTCAG TATAGTCATAGCAAAATGTGATTGTACCCAATTATGATATTTTTTGCTTTGTAATATAATCACAATGGAATGAATTGATGAGTGATCTATGACAAAATTT GAAGGTTATATCTGAAAAATTAAAGCTTGTAGTGGATTGATTGAGCAAGCAAAATGCTAACCCACACATTCTTGGCCTAACATTATGACAGTTTTGTTGA TTTGTCCTAACTTAACAAATAAAATAATACTATCTGTGTAAAGATTTATACATAGTTACTATATCATTTGTATTACTTTTATTTAAGAGTCAATAGTTAT TAAAAATGAATGTTGG BLAST
Tissuepods
Gene nameLI_gene_164901; 
Additional informationdetails; 

Expression of Ll_transcript_286772

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_286772
BlastpProtein BREAST CANCER SUSCEPTIBILITY 2 homolog B from Arabidopsis with 44.34% of identity
BlastxProtein BREAST CANCER SUSCEPTIBILITY 2 homolog B from Arabidopsis with 44.1% of identity
EggnogBreast cancer 2, early onset(ENOG410Y06W)
KeggLink to kegg annotations (AT5G01630)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019438733.1)
PfamBRCA2 repeat (PF00634.17)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;