Ll_transcript_436428

• Id Trinity: TRINITY_DN48900_c0_g1_i12
• Name Transcript: Ll_transcript_436428
• Sequence: TATGCTGCATACTATGGCCATTCTTCTTGCCTTAAGGCAATTCTTTCAACTGCTCAATCTAGTCCAGTAGCTGCTTCTTGGGGGTTTGCTCGGTTTGTGA ATATTAGAGACGGAAAGGGCGCAACACCGTTGCATTTGGCAGCTCGTCAAAGACGGCCTGAATGTGTGCATATTCTCTTAGATAGTAGAGCTCTTGTTTG TGCTTCTACTGGTGGATATGGCTGTCCTGGGAGCACTCCTCTTCATCTAGCAGCCAGAGGTGGATCCGTGGACTGCGTCCGCGAATTGTTGGCATGGGGT GCAGATCGTCTTTATCGCGATGCATCAGGGAGGATACCATATATAGTTGCTCTGAAACACAAACATGGAGCATGTGCATCATTGCTAAATCCAACATCTG CAGAGCCTCTTGTTTGGCCATCTCCATTGAAGTTCATCAGTGAGCTTAATGCAGAAGCCAAAGCTTTATTAGAACAGGCCTTGATGGATGCTAACAAGGA AAGGGAGAAAAACATGTTGAAGGGTAGTGCTTACATTCCATCTTCTTTACATTCTGATGGGGTAGATGACAATATCTCTGAGGTTAGTGAATCAGAATTA TGCTACATCTGCTTTGAGCAGGTATGCACAATTGAAGTCCAGAACTGTGGCCACCAAATGTGTGCACAATGCACACTAGCCCTTTGTTGCCACAACAAGC CTAACCCCACAACCAATTCTCTTACACCACCAGTGTGTCCATTTTGTCGAAGTGTTATAGCTAGACTAGTAGTTGTAAAAATAGAAAATGATAATGATAG TGAAGGTGATGAAGATAGCATTGATATGAATTGTTCTAAACTATGTAAGTCAAAGAAATCAAGAAACTTGAATGATGGAGGTAGCAGTAGCTTCAAGGGA TTATCATTTGGAAAATTGGGTTGCTGCAACTCTGGAAGAATTGCTGCTGAAAATGAGTGGGTTCATAAACAGTGACATGTGGTTCATCAATCATTCTATA TTGGTAAATACGGTAATTAATAGTTTGTTTGTGAGTTGAATTTTGGAGCGGAAAGAAGGGAAATGGAAGGCTTGAGAGCCATGTCACAAGTGTATTTCAT GACTTATTCCCTTTCCGTTCCTTTCCCTCTAAAATGCAACTCCCAAACAAGCCGTAAGGTGCGTGAGAAGTAAGGCAAACAAATCAAAGTCATAAAGGGA AGAATATTATGTAATTTGGGAAATAAGCAAAGTGAGTGCATGTTTCCGGGAGAATCAAATTTCATTCTTAGTTGGGTATAAAGAATACTTTATAATTTAT TATACTACCTTATAAATTAAAAATATTTTATAATTTATTCTTATTTGTATCTCACAAGTCCCAATTTACCGAGTTCTCAATTCTGTCATATTTTTTAGAA GTTGTGGCCTCATTTAG
• Tissue: pods
• Gene name: LI_gene_164917;
• Additional information: details;

Expression of Ll_transcript_436428

FPKM

• PAB: 1.3
• PNAB: 7
• PS1: 7.4
• PS2: 6.6
• PS3: 8.1
• PW1: 3.1
• PW2: 3.9
• PW3: 3.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_436428

• Blastp: Putative E3 ubiquitin-protein ligase XBAT31 from Arabidopsis with 70.62% of identity
• Blastx: Putative E3 ubiquitin-protein ligase XBAT31 from Arabidopsis with 69.05% of identity
• Eggnog: Ankyrin Repeat(COG0666)
• Kegg: Link to kegg annotations (AT2G28840)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019436220.1)
• Pfam: Ankyrin repeat (PF00023.29)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;