Ll_transcript_436433

• Id Trinity: TRINITY_DN48900_c0_g1_i17
• Name Transcript: Ll_transcript_436433
• Sequence: TATGCTGCATACTATGGCCATTCTTCTTGCCTTAAGGCAATTCTTTCAACTGCTCAATCTAGTCCAGTAGCTGCTTCTTGGGGGTTTGCTCGGTTTGTGA ATATTAGAGACGGAAAGGGCGCAACACCGTTGCATTTGGCAGCTCGTCAAAGACGGCCTGAATGTGTGCATATTCTCTTAGATAGTAGAGCTCTTGTTTG TGCTTCTACTGGTGGATATGGGTAATGATCTATCAAAGTTGTGGTGATTTGAAATTAAGCTTGTTTTGTGAATTAATCACTTGCTATTTATAGCTGTCCT GGGAGCACTCCTCTTCATCTAGCAGCCAGAGGTGGATCCGTGGACTGCGTCCGCGAATTGTTGGCATGGGGTGCAGATCGTCTTTATCGCGATGCATCAG GGTATAGTTTTGTTTCAATGCAAATTCTTACTATTTTTGGAGAAGTTCCTATTGGGTTTGAGAGTTAATAACATGTCTAAACACTTGACTATAGTTTATG TGGTTTTATTGTGAACATGATTTGTTATCTTACTGTGTTATTGTAAATCAAAGTTTGGCAAAATCAATGATCTAATAATTCAATCAATGATCTTGCTGTG TTATTCTATAAAAATGCACAGGAGGATACCATATATAGTTGCTCTGAAACACAAACATGGAGCATGTGCATCATTGCTAAATCCAACATCTGCAGAGCCT CTTGTTTGGCCATCTCCATTGAAGTTCATCAGTGAGCTTAATGCAGAAGCCAAAGCTTTATTAGAACAGGCCTTGATGGATGCTAACAAGGAAAGGGAGA AAAACATGTTGAAGGGTAGTGCTTACATTCCATCTTCTTTACATTCTGATGGGGTAGATGACAATATCTCTGAGGTTAGTGAATCAGAATTATGCTACAT CTGCTTTGAGCAGGTATGCACAATTGAAGTCCAGAACTGTGGCCACCAAATGTGTGCACAATGCACACTAGCCCTTTGTTGCCACAACAAGCCTAACCCC ACAACCAATTCTCTTACACCACCAGTGTGTCCATTTTGTCGAAGTGTTATAGCTAGACTAGTAGTTGTAAAAATAGAAAATGATAATGATAGTGAAGGTG ATGAAGATAGCATTGATATGAATTGTTCTAAACTATGTAAGTCAAAGAAATCAAGAAACTTGAATGATGGAGGTAGCAGTAGCTTCAAGGGATTATCATT TGGAAAATTGGGTTGCTGCAACTCTGGAAGAATTGCTGCTGAAAATGAGTGGGTTCATAAACAGTGACATGTGGTTCATCAATCATTCTATATTGGTAAA TACGGTAATTAATAGTTTGTTTGTGAGTTGAATTTTGGAGCGGAAAGAAGGGAAATGGAAGGCTTGAGAGCCATGTCACAAGTGTATTTCATGACTTATT CCCTTTCCGTTCCTTTCCCTCTAAAATGCAACTCCCAAACAAGCCGTAAGGTGCGTGAGAAGTAAGGCAAACAAATCAAAGTCATAAAGGGAAGAATATT ATGTAATTTGGGAAATAAGCAAAGTGAGTGCATGTTTCCGGGAGAATCAAATTTCATTCTTAGTTGGGTATAAAGAATACTTTATAATTTATTATACTAC CTTATAAATTAAAAATATTTTATAATTTATTCTTATTTGTATCTCACAAGTCCCAATTTACCGAGTTCTCAATTCTGTCATATTTTTTAGAAGTTGTGGC CTCATTTAG
• Tissue: pods
• Gene name: LI_gene_164917;
• Additional information: details;

Expression of Ll_transcript_436433

FPKM

• PAB: 0
• PNAB: 0.1
• PS1: 0.6
• PS2: 0.3
• PS3: 0.3
• PW1: 0.1
• PW2: 0
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_436433

• Blastp: Putative E3 ubiquitin-protein ligase XBAT31 from Arabidopsis with 65.2% of identity
• Blastx: Putative E3 ubiquitin-protein ligase XBAT31 from Arabidopsis with 62.39% of identity
• Eggnog: Ankyrin Repeat(COG0666)
• Kegg: Link to kegg annotations (AT2G28840)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019436220.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;