| Id Trinity | TRINITY_DN48900_c0_g1_i20 |
|---|---|
| Name Transcript | Ll_transcript_436436 |
| Sequence | ATTTAATGAGTTAATAAGAACTATTACAGAGGCTATGGAATCTGACTGATATTATAACCAAAAACAAAGTCAGTTTGAGTAATTGCTCATCACTGACACT GTCAGCTACCCTTCTTTCTCTCACTTTCCCCTTTGTCTATATATCTCTAACTCCATAAATGTGAAAGTAAACTTTGAATTGCAAACTTGAGAAATCTCAA CCACCTACCAATCCTTTCTGTGCCAAAGGTGGCGCAGTCAGTGAAGAAAAAGAGCAAAAAAAGGAGTGTGGGTTCTTATATTCATAGATGGGTCAGAGTT TGAGTTGCAGAGGGAGCCATGAACATGGTCTCTTCCGTGCTGTTCAGCATGGTGATTTAGAAACTTTTGCAACTCTTTTAGAGACATGTCCTTCTCTCAT GCACCATACCACTGTCTATGATCGCCACTCTCCTCTTCATATTGCTGCTGCTAATGGCCAGATCCAGATTCTAACAAGGCTTTTAAATGGATCTGTGAAT CCAGATGTTTTGAATCGCCAAAAACAGACTCCGCTTATGCTGGCAGCAATGCATGGAAAGATTGCTTGTGTGGAAAAGCTACTTGAAGCCGGTGCTAATG TATTAATGTTTGATTCAGTTTATGGAAGAACCTCCTTGCATTATGCTGCATACTATGGCCATTCTTCTTGCCTTAAGGCAATTCTTTCAACTGCTCAATC TAGTCCAGTAGCTGCTTCTTGGGGGTTTGCTCGGTTTGTGAATATTAGAGATGGTAGGGGAGCAACACCATTGCACTTGGCAGCACGTCAAAGACGACCT GAATGTGTACATATCCTCTTAGACATTGGATCTCTTGTTTCTGCTCCTACCGGAAGATATGGCTGTCCTGGGAGTACAGCTCTTCATCTAGCAGCTAGAG GGGGATCTCTGGATTGCATCCGTGCACTGTTGGCTTGGGGTGCAGATCGTTTTCAACGTGATACATCTGGGAGAATGCCATATATAGTTGCATTGAAACA CAGACATGGTGCATGTGCAGCTTTGTTAAGTCCTACATCTGCAGAGCCTCTTGTCTGGCCATTATCTTTGAAAGTCATCAGCGAGCTTAATCCCGAAACA AAAGCTTTACTAGAGCACGCCCTGATGGATGCTAACAGGGAAAGGGAGAAGAACATATTGAAGGGTACTGCTTACTCTCTTCCATCTCCATTGCACTCTG ATGTGGTAGATGACAATATCTCTGAGGTTAGTGAGACAGAATTATGCTGCATCTGCTTTGAGCAAATATGCACAATTGAAGTCCAGGACTGTGGCCACCA GATGTGTGCACAATGCACACTAGCTCTCTGTTGCCACGGCAAGCCCAATCCTGCCACGGCTTGTCTTACTCCACCACTTTGTCCATTCTGCCGGACCGCC ATAGCTAAACTGGTGGTTATCAAGACAGAAGAAAACTATGATGACATTGATCAAGATGGTTTTGATATCAATTGCTCCAAGATAAGCAAGTCAAGGAAAC CGCATAACTTAAATGAAGGTGATAGCAGCAGCTTCAAGGGACTAACCACGGTCGTTTCATTTGGAAAGATGGGCGGTCGAAGTTCTGGAAGGATTGCTGC TGAAAATGAGTGTATTGATAATAAACAACAGTGATGTCGATGCCCATGCTTTCTGCTTAATTGCTTATCAGTAATTCCATATTAGCAAATTGATAAGGAG TTGCTTGACTTGCAAGGCAAAATGATAGTACAAAATGTTGGTGCATTGCATGTCATGTTTTGGTTGTAAATTGTAATATTATTGTTACTTGAGAACTAAG AAGCATTCGCTTCAATGATTTTGGGCAATGGTATTGTGTATATGTAATTCAGTGAAATGAGAAATTATTTTTCTCTAAGGTGTAAGTCTCTAAGATCATA AGAAAATGTAATTTGTTGTTTTGCTTCTGATTTGTTTCTGTGTACCACAATTAGCAATAAAATATGAAAGGGCG BLAST |
| Tissue | pods |
| Gene name | LI_gene_164917; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_436436
| Blastp | Putative E3 ubiquitin-protein ligase XBAT31 from Arabidopsis with 67.91% of identity |
|---|---|
| Blastx | Putative E3 ubiquitin-protein ligase XBAT31 from Arabidopsis with 67.91% of identity |
| Eggnog | Ankyrin Repeat(COG0666) |
| Kegg | Link to kegg annotations (AT2G28840) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019448632.1) |
| Pfam | Ankyrin repeats (3 copies) (PF12796.6) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |