Ll_transcript_436424

• Id Trinity: TRINITY_DN48900_c0_g1_i9
• Name Transcript: Ll_transcript_436424
• Sequence: GAGAGGTGAAATCTCTTCACTTTCACCTTTCCCCAACCACCATCATGGGTCAGGGTCTGAGTTGCAGAGCTAACCATAATGAACATGGTCTCTTCACTGC GGTCCAGCATGGTGACCTTCAAACAGTGGCAACTCTTCTTCAAGCTGACCCTTCTCTCTTGCACCACACCACTGTCTATGATCGTCACTCTCCTCTTCAT ATTGCTGCTGCCAATGGCCAGATCCAGATTCTATCAAGGCTTTTACATGGATCTGTTAACCCAGATGTTTTAAATCGCCAAAAGCAGACTCCGCTTATGT TGGCAGCAATGCACGGTAAAATCGATTGTGTGGAAAAGCTACTTGAAGCTGGAGCTAATGTGTTAGTGTTTGATGCCATATATGGAAGAACATGCTTGCA CTATGCCGCATACTATGGCCATGCTTGTTGCCTTAAAGCAATTCTTTCATCTGCTCAATATAGTCCAGTTGCTGCTTCTTGGGGATTTGCTCGGTTTGTG AATATTCGAGATGGAAAGGGCGCAACTCCACTGCACTTGGCAGCTCGTCAAAGACGGCCTGAATGTGTACATATTCTATTAGACAGTGGAGCTCTTGTGT GTGCTTCAACTGGTGGATATGGCTTTCCTGGGAGCACTCCCCTTCATCTAGCAGCTAGAGGTGGATCTTTGGATTGCGTTCGCGAATTGTTAGCATGGGG AGCAGATCGACTTCATCGCGATGCATCAGGGAGGATACCGTATGTTGTTGCTCTGAAACACAGACATGGAGCGTGTGCATCGTTGCTAAATCCCACATCT GCAGAGCCTCTTGTGTGGCCATCTCCGTTGAAATTCATCAGCGAGCTTAATCCGGAAGCCAAAGCTTTATTAGAACAGGCCTTGATGGATGCTAACAAGG AAAGGGAGAAAAACATATTAAAGGGGAGTGCTTACGTTCCATCTCCATCACATTCTGATGGAGTAGATGACGATATCTCTGAGGTTAGTGAGTCAGAATT ATGCTGCATCTGCTTTGAACAGGTATGCACAATTGAAGTTCAGAACTGTGGCCACCAAATGTGTGCACAATGCACACTAGCCCTTTGTTGCCACAACAAG CCTAACCCTACCACGGCTTGTCTTACTCCGCCGGTATGTCCATTTTGTCGAAGCGTCATAGCTAGACTAGTGGTTGTGAAGATAGAGAATCATCATGATA TTGAAGCTGATCAAGATAGTGTTGATATTAATTGTTCCAAGCTAAGCAAATCAAGGAAGTCCAGAAACTTGAACGATTGCGGTAGCAGCAGCTTCAAGGG GCTATCCTTCGGAAAATTGGGTGGCCGCAGCTCCGGAAGGATTGCTGCCGAAAATGAGTGGGCTGACAAACAGTGATATGTGGCTAATCAATGATTCAAC ATTGGTGAATACTGCAACTAAAGTGCTTGAGCAGCAAGCAAGGCAAAAAAGTGAAGTTACAAAGTGAAGGAATATTTTGTAATTTTGGAAAATAAGCAAA GTGAGTTGAACTTGAAGTGAAGTTAGCGGTAGGTACAAAGAATGGTTGGGAAAACGAAGAAGGGGATGTTATGTTGTTATTTGTTGTAGTATTGTTATTA TTATTTTTACTTGAGAATCAAGAAGCATCACCTGCATCCATTATTTTAGCATAGTCAATAATATTATTTATAGGTGAACCAGTAAAGTGAGAATAATTTG TCTCGAGAGTATAATGAATGAGTATTATATGAAAGTGTGTTGCTTATTTAATTTGCTTATGGTTTTGTTTGTTTCTGTGTACGCGTATATGGTAGAGTAA TAATGTAGCTAAGAGAAAGACACATGGCTTTTGTTGCTTGTCATGTGATCATGTCTACATTGGAAGAATTATTTTAATTTATTCACTCGATCGAATAACT TTGCTTGTATATATAAATAAATCATAAATTTTAATAATAGTGCTGTCTCTGTTCTGACTTCTGAAGTAAAAAA
• Tissue: pods
• Gene name: LI_gene_164917;
• Additional information: details;

Expression of Ll_transcript_436424

FPKM

• PAB: 45.4
• PNAB: 34.1
• PS1: 35.8
• PS2: 52
• PS3: 52.2
• PW1: 118.7
• PW2: 123.2
• PW3: 196.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_436424

• Blastp: Putative E3 ubiquitin-protein ligase XBAT31 from Arabidopsis with 69.96% of identity
• Blastx: Putative E3 ubiquitin-protein ligase XBAT31 from Arabidopsis with 75.26% of identity
• Eggnog: Ankyrin Repeat(COG0666)
• Kegg: Link to kegg annotations (AT2G28840)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019458241.1)
• Pfam: Ankyrin repeats (many copies) (PF13637.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;