| Id Trinity | TRINITY_DN48902_c3_g2_i16 |
|---|---|
| Name Transcript | Ll_transcript_437833 |
| Sequence | CACAAAAGGGACAATCCTTCTTGGGTAGCAATACAAAAGATAGCTGCAAGAGACGGAAAGATTGGATTGCACAATTTTGCGCCGATAAGGCCATTGGGTT GCGGAGATACTGGCAGTGTTCATTTGGTGGAACTCCAAGGTACCGGCGAACTATATGCAATGAAGGCAATGGAAAAATCCGTAATGCTAAATCGTAATAA GGTTCACCGTGCATGCATTGAGAGAGAGATCATATCATTACTTGATCATCCTTTTCTTCCAACACTATACACTTCATTTCAGACTTCTACACATGTATGT TTGATTACTGACTTCTGCCAAGGTGGAGAGTTATTTGCCTTGCTTGACAAGCAACCCATGAAATTGTTTAATGAAGAATCCACCAGGTATTTATGCTTTT CCATTTTTTAAGCCTTGTGATTACTTCAATTTTTCTGTATTTATGTACATGATTCTTCTGAAAAATCTTTACACTAGAAGTATATCAAATTAAGTCCTTA CTGAAATAGATTTTTACGGTAAGCCTCGACGCAACAGTAAAGATGTTGCTTAGTGACCAAAAAGGTTACGAGTTCAAATCCTATAAACAACCTCTCCGCT TGTAATCTCACTAGATGGGAGTCTCGCATACTCAGCCACCCTTTTGATTTTTAACATAGATTTTTATATGTATTATACTTATTAATTTATACTATGTTAA CTTTGATCACATCTCTAGATTCTATGCAGCAGAGGTTGTCCTTGGTTTGGAATATCTCCACTGTTTAGGTACACTGTTCATTATATCCTCATGTTATTAG TTCATTGTACTTGCTTAGGCAATTTCATGCTTATATATCCTCAATCTATTTTTTCACAACATCAATAGGTTATGGTTCTTAAGTTGTCAAAATATATTTT TCTTTTACCGGATCGGTATAGGTATAATTTATCGAGACTTGAAGCCGGAAAATATCTTACTTCAGAAAGATGGGCATGTTGTATTGACTGATTTTGATCT ATCATTCATGACATCTTGTAAACCCCAGGTATGCATTTCTTTTCCTGTATAAACTAGTCCACTTATATAAATCATTGGAAATTCTTGGCACTGATCTAGT TTTGGTAAAAAAAAAGTATCAGTTATCCAAATCACTCTCTCTTTCTCCCATTAAAATCCATAATCTTTTGTAAAACAACTTTTCTTAACTATCACTACAT GAAAATTGAATGCATTGCCATGTTTTTTCCATATAGCTTGAAAACATTGTTCTATTTTCCCATCCTACATAATGTGGCTTGCATCTGCTTGATAATTGTC TAATGCTAAAGTTGGAATTTATGCATGCAGGTTGTGAAACAGCGACTACCTAGTAATAGACGAAAATCTCGGAGTCAACCTCTACCAACCTTAGTTGCAG AGCCAGTTGCGCAATCAAACTCATTTGTCGGAACTGAAGAATACATAGCTCCTGTATGTTGCATTTTATCTATGCTTCATAATATCTTAGTAATCTACAA AGATCTCCATTCAGGTTTAATGTGTAAATCTCCTTTGTTTCTAAAGTTACATCGACATCGCTGTTATAAATTATAGGTTTGTCATGCTAGTAAAGTTATT TTATCATTTACATCATCATTATCATTATCATCATTCATGGTTTCTAAATTACTTGATAACAGGAAATTATAACTGGAGCTGGGCATACTAGTGCTATAGA TTGGTGGACCCTCGGTAAGCAATTCCGCACTAATGTTTGAATGCGAAAAATCGAGAGATTTCTTTGTTTTCTTCTTCTTTTGTTGCTGTGTTTCTTAAAA GATTTGTTA BLAST |
| Tissue | pods |
| Gene name | LI_gene_164929; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_437833
| Blastp | Phototropin-2 from Oryza sativa with 75.56% of identity |
|---|---|
| Blastx | Phototropin-2 from Oryza sativa with 70.2% of identity |
| Eggnog | Histidine kinase(COG2202) |
| Kegg | Link to kegg annotations (4335426) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019424317.1) |
| Pfam | Protein kinase domain (PF00069.24) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |