| Id Trinity | TRINITY_DN48904_c1_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_436894 |
| Sequence | AGTAAGTCTAAAAAGACTTACTCTTGGAGTAAGTTGATCCCCTCCCTTAAATTATATACGGAAATGTTTAAAATGTATGCCCAAGTTATAATAACTTGTC TAATTAGTGGTAATAAAAAGTAAAAATGAAAAAATTAAGAGTAAGAACTTGTAGGATGAAAGTTAGGAGTATCAGATGGTGTTCGTGAAGTGTCTCACAT TGGTGCAACCATTTTGAAATCTCTTCTGACATATTTTGATTGGAATCCTTTGTGTATTTTTAATCTAATCCTTCATGTATTTCCTGATATGTACCCTTTA AGGGATTGCTTTCCTTTTTGTGTAAATCTGTGGAGTTTCATGTACTTGTTGTTTCGCATGTATAATGCAGCTGATTTCTTACAGATCTCTAAGCTAAACT GCTTATGTTTTTCAATTTCTATCTTCAGCTCTTCTCCTCCCCACCGATACCTAAAGAAAAAGAAAATTTGCAAATTGTTTTATATGCTGTGTTTGTTAGT TGATTTCTGTATGTACTAATCTTGCACGGTTTGCATTTCTACAGTCTTCCCTCGCTGCTGCTAGAGCGGACAATTTCTACTATCCTCCGGAATGGGACCC AAGCCAGGGTTCTCTGAACCAGTTTCATGGTCAACATGCCTTGAGAGAGAGAGCAAAGAAGATAGATCAGGGTATCTTGGTTATAAGGTTTGAGATGCCT TTTAATATATGGTGTGGCGGATGCAATTCTATGATTGCAAAGGGTGTCCGGTTCAATGCAGAGAAAAAGCAAGTTGGGAATTACTACTCCACAAGGGTAT GTCAAAGTTGACTGCAAAAACATTTGCAATGGCAAAGATTATTATTGTATTTTGTTATATATTTTTCGAAGACGAAGTAGGCGTATAAGCACCTGTGCAC ATACAAAATAATTTATCTCCTTAGAATTTACTTATGATCCAAAGATAGCATAAACTTTTACACTAACAATAGAGTAAATCTTATGGTGATTCATACTTTC ATTTTATATTAAAAGGCAGCCCAATGTATAAGGCTCCTAGCCAGTGGGTTTGGGGAGGGTAGATATACATAGTCTCTCCCTCACAATCGAAGAGGTTATT TTTGGGATTGGAACTCATGAGTAATGACCTCTAGATCACAAGACAAACAACCTTACCATTGTGCCGAATTGCCGATGCTCACATCTCATGGTGCTTCATT TTAAATATTTACATGAAGTCTTATTGTGATTGAAATATACTCTATTGATGTGATTTCTTCTTTATTCATAGTATAAATAATTCTACTCTTCCCACTAGTG TATGTGCATGTCTAATTGTCTACCCCATCATTTTCCACATTTATGCTTTACATTCTTTCGGAACTTCTCTAATTGTGGTCAGCCTACTTTGTTTTGTTTA CTATTACACCAACCAAGCCTTAATCCCACTGGGTTGGGTCGAGTATATGAATCGAACATTATATTTTTCTGTTATAAGTCATGTTCATTGAGAAAACGTT GATCACTATAGTTTTTTTAATCGTTTTGCCTATTGTTTTTCTTGGCCCTCTATGCATCTAAAAATTTGATTAACCTCTATTTGATCTACTCTCTTTATTA AGGCTTTTAATGGTATCTTCTACTCATTCCCAAACCACCGAAGTTGTGATTCTACCATATTTTCTATAATAGGAACTATCTGAACTTTCTCCATAAGACA TTATTCGTAATTCTATCTTGTTTAGTGTTACCACTCGTCCAATGTCACATTCTCATCACTGCAAAATCCTAATTTTTAGCCTCACTCACTACTCAATAAA ACAATTGGTCGACCCTAACAGTTGCAGAAACAATATATGTGTATTACATATATGGCAATATATTCTTATCTGTTATTTTTCTAGGTATATACGTATAGTG TAGTTTAATAATAGAATTTTCTATTTTAGGTGGAGCTACACTTTGTGTTATGCTCCACCTCTTCTACGATCCTACTCTCCCCTCCCACTTTGAGTTTGAC TCTATGCTTTAATAACATAGCTCCTAAGACGATTGCTCCAAAACTCTTTGTTGGAATCTCCTTCCTTCCTCACCCTGAAAATTCCACCAATTGATTCTTG GGACTCTATCTTGGCCCTTTCTCTTTATTCTTAACCCTTACATCCATAACCAAAACTCGTTGGATCGTCAAGCTCCCTCCAGGTATGACTTTGCAATCCA AGCAAAAAGAATTATTTGATTTCCTTATAATAAAAAAATCCTATGTGAACATGCCACCCACTTTGAAATTTGATTTGTTTTGTTTACTAATTAGTTAATC TATCTGGGTACATTCAGATATGGAGCTTTAGCATGAAGTCTGCATGCTGTAAGCATGAGATTGTCATCCAGACTGATCCAAAGAACTGTGAGTATGTGAT CGTTAGTGGTGCTCAGAAAAAAACTGAGGATTTTGATGTTGAGGATGCAGAAACGTTAGAATTACCTGCTGATGAAGAGAGAGGGAAACTTGTAGATCCA TTTTACCGCCTTGAACATGAGGAAAAAGATTTGAAGAAAAAGAAGGAAGCTGAACCAGTGCTAGTGCGTCTCCAGCGACTATCTGACGCTAAACATTCAG ATTCCTATGCCATAAATAGGAGTCTCAGGGCCCAACTTAGAAATCAAAAGAAAAGAGTTGCGGAAGAAGAGGCCTCTTCCAGGAAGCGGGGCCTTGGCAT ACGGCTGCTTCCAAATTCAGAACAAGATGCCGCTACTGCAGCAAAAGTGAAGTTTTCAAGTAAGTTTGACAAAAATAGGAAGGACAAACGGGCATTGATC AATGCTTCCTCCATCTTCCCCGGTTTGGCCGTCTCTTCTACCTCTGATAAGAGAAGACTGGAGCTAGAGTCTAAGAGAAGAAAAATAGCTGCAACCAAAG CATCTACCCTACTGGCTGGGGCATATAAGCCATCATCATGGTCACAGAATGCTGTTTCGTCAACCAGACAAAAAGTAGCTTCAGTGAATGTAAGACGGTA GCCTCTGGAGAGGGTTACTCTCTGGTGTTTGAGCTTGTACATAGAAGTTGATCAACAAGGTTTTCTGGTTTATTTGTGTTGGAGTTTTAGATGAAATGGT GTTGTGTGATATTTTTGTATTCTATATATGTTATAAGCCATTTTGAATGTGCCACGGAAATGGTTATAATTTCTTTCACAATTTAATTCTTGATTATTTG TTGTTTGCAAGATTGAATATATTGAGAGGCAAATTATATGTTCCCATGTTTCACGTTTGGCAATATAGTGTGACAAACAGGCAAATTTCTAGAAGCTTCA GGTTACAAGGTTGCGTTAACCATGTGACCCCATTTTTATTTCATTATCAAATCATGC BLAST |
| Tissue | pods |
| Gene name | LI_gene_164944; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_436894
| Blastp | Coiled-coil domain-containing protein 130 from Bos with 38.19% of identity |
|---|---|
| Blastx | Coiled-coil domain-containing protein 130 homolog from Dictyostelium with 62.65% of identity |
| Eggnog | Coiled-coil domain-containing protein(COG5134) |
| Kegg | Link to kegg annotations (614791) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019457840.1) |
| Pfam | Family of unknown function (DUF572) (PF04502.12) |
| Rfam | - |
| GO | - |