Ll_transcript_437129

• Id Trinity: TRINITY_DN48906_c0_g1_i10
• Name Transcript: Ll_transcript_437129
• Sequence: CTCGTGGGTATATGGCTAATCCCAATAAATTACGAAGCTGATTACTTGAACGATATAGAATCGAATTATATAGCAACAGAACATTGTTTGTTGCTTTAAC AATAAACAAATAGTAATGTTATATCCTCCTACTAAATCCTCATACTATAAGAGAGAGTAGGAAAGAAATGAGAATGAATAAAGCTAAAAGATGATTACTC GTAGAGATTAGATTGAAGTTGAAGTAGAGAAGAAAGGGATTTGAAGCAATGACTATGAAGATTGCTCCTCGCAGATGATAACATTGATTAGTTGATCTTT GTTTTGTTTGAATCAGAGTTTGCAGCTATAGAAGAAGAAAGGCTTTAGGTTTTTGTCTTCAAGAGTGAATTGAGACAACATTGCCAAGTTTTAAGCTTTT CACTGTGACACACAATTTTTGAGCACTTTTGACTAGATTAAGTGAAGATTATAGAATGGGTAGACATGGAGTGTTGAAAAAAGTGGTAGGTGACCTTTCA TTTCTTGATTCATCACCTTTTGCCAAGCTCTTAGACTCTTGTGTTCGGTCAAGGTCTGTTCTTGAAGCGCGTAACGTTCATGCTCGAATCATTAAGACCC AGTTTAACTCTGAAATCTTCATTCAGAACAGGCTCATTGATGCTTATGGAAAATGTGGTTGTTTGGGTGATGCACGCAAAGTGTTTGATCATATGCCCCA TAAGAACACTTTTAGTTATAATGCGATTTTAAGCTCGTTGGCGAAGGCTGGTGCTGTGGACGAGGCTTTGAATGTGTTTAATTCGATGCCGGAACGTGAT CAGTGCTCATGGAATGCTATGGTTTCCGGTTTTGAACAACATGATCATTTTGAAGAAGCTTTGAGATTTTTCGCTGATATGCACCGTGAGGATTTTGTAC TTAATGAATACTCTTTTGGAAGTGCTCTTAGTGCTTGCTCAGGTTTGAATGATTTGAATATGGGTGTTCAAATTCATGGTTTGATTTTGAAGTCGCGCTA TTCGTTAGATGTTTACATGGGTTCTGCTCTTGTTGACATGTACTCTAAGTGTGGTTTGGTGGGATATGCTCAAAGATCTTTTGATGACATGTTTGTGAGG AATATAGTTTCTTGGAACAGTTTGATTACGTGCTACGAGCAAAATGGTCCCGCTGAGAAAGCTCTAGAGGTGTTTGTAAGGATGATGAATAGTGGGATTG AACCTGATGAGGTTACTTTAGCCAGTGTGGTCAGTGCTTGTGCAAGCTTGTCGGCAATTAGGGAAGGATTGCAAATTCATGCTCGTGTTATGAAATCTGA TAAATTCCGGTATGACCTTGTGTTAGGCAATGCATTGGTTGATATGTATGCAAAATGCAGTAGAGTAAACGAAGCTAGGTTGGTTTTTGATAGTATGCCG CATAGGGATGTGGTATCTGAAACCTCCATGGTTAGTGGATATGCAAGGGCAGCTAGTGTGAAAGATGCGAGAGTAATGTTTACAAACATGACAGAGAGGA ATGTGGTGTCTTGGAATGCACTCATTGCAGGTTATACTCAAAATGGAGAGAATGAAGAGGCTGTTAGTCTTTTCCTCCTCCTGAAGAGGGAATCCATTTG GCCAACCCATTATACCTTTGGGAATCTACTTAATGCATGCGCAAATCTTGCTGATCTGAAGCTTGGTAGACAGGCCCATACTCACATTTTGAAGCATGGG TTGAGGTTTCAGTCTGGAGAAGAATCTGATATTTTTGTGGGGAATTCCCTCATTGACATGTACATGAAATGTGGACTGGTCGAAGATGGATGCCTTGTTT TTGAAAAGATGGTAGGGAGGGATAATGTCTCATGGAATGCCATGATAGTGGGATATGCACAAAATGGTTATGGTACAGAGGCCCTTGAAATTTTCAGGAA AATGATGCTATCTGGAGAAAAACCAGATCATGTTACTATGATAGGAGTTCTATCTGCATGTAGCCATGCAGGACTTGTTGAAGAAGGACGCCATCACTTC CAATCAATGTCCGAACATAATTTAGCACCATTGAAGGACCATTTTTCATGCATGGTTGATTTACTCGGTCGGGCGGGTTGCCTTGATGAAGCAAAAAAAT TGATAGAGACAATGCCAATGCAACCTGATGCTGTTGTTTGGGGATCTTTACTTGCTGCTTGTAAAGTTCATAGAAACATTACATTAGGGAAGTATGTTGC AGAAAAGCTCTTGGAGATTGATCCGTTCAACTCTGGACCTTATGTTCTTCTTTCAAATATGTATGCTGATCTTGGTAGATGGAAAGATGTGACGAGAGTC AGGAAATTGATGAAGCATCGAGGAGTAATTAAGCAACCCGGTTGCAGTTGGATTGAAATAGAAAGTCGTGTGCATGTTTTCATGGTGAAAGATAAAAGGC ACCCTCGTAAGAGGGATATCTATTCATTTTTGAAAATTCTCACACAACAGATGAAGCGATCTGGCTATGTTCCACAAGTTGAAGATGATGAGATTTATGA GGAGGAAAGTGACTCTGAACAAATTTTACATTATGAAATGGAAATGGCTGTAGACGCTGCAGTTGGATAAAATACTTCAACCTTTTTGCTAAGCATTATT TTTAGTGGTGATTCATTTATTGTTGCTAGTACGGATGGTGTGGGAACGAAAGTAATGCTGGCCTTTGAAACTAGAATTCATGATACTATCGAGATTGATC TGGTCGCAATTAGTGTCAATGATATTGTTACTCAAGGAGCAAAGCCACTATTTTTCCTAGATTAATTCGCCACTGGTCACCTTGTTGTTGACATTCCTGA AAAGGTTATAAAAGGCATTGTTAATGGCTGTCAGCAATCTGATTGTGTTCTTTTGGGAGAAGAGACTGCAGAGATGCCTGGTCTATATAAAGATGGTGAG TATGATCTTAGTGGTTGTGCGGTTGGCATTGTGAAGAAAGATTCTGTAATCAATGGGAAGAACATTGTTCCTGGTGATGTTCTTATTGGTCTTCCATCTA GTGGAGTTCACTCTAATGGTTTCTCACTTGTGAGAAGAGTGCTTGCTCAAAGTGGTCTCTCATTGAAAGATAAACTTCCTGGTGGTGATGTTACAATTGC GGAAGCTTTGATGGCCCCAACAGTTATTTATGTCAAACAGGTGCTTGACTTAGTTAGCAAGGGAGGTGTTAAGGGAATGGCCCACATCACAGGTGGTGGT TTTACAGAAAACATACCCAGAGTGTTTCCAGAAGGTCTTGGTGCTCTTATATACAAGGACTCATGGGAAATACCTACTTTGTTCAAGTGGCTTCAGGAGG CCGGGAAAATCGAAGATGCCGAGATGAGGCGGACTTTTAACATGGGCATAGGGATGGTGCTGGTAGTCAGTCCAGAGACATCAAATAAAATACTTGAAGA TAAAGACAATACAGAGAAATTCTACCGCATTGGTGAAGTTACAAGCAACAAAGGAATGATCTTTAGTTAATTTTGGTATTGAGTTTACTCATCTTGTATC TTTCTAATAATAACTTCATGACAAGTTTCACTGAGTGTTGGATCATAATGGGGGCCTATTAGGTTTCCTGACATAGATTTTAGGACAAATGCACTTTAGC ACTCTGATGTTGGGTCACTTGCTATTTAATATTTAATGCTTAAAAATGTGCATTTTCAGTTCTACATTTTTGAAGTGTGTAAAACAAACCCTCAGGCCTA AGTCAAGTTTTCTGTGAGAAATAACTGTAGCGGAAATGCAATTTTATTGCAAAAATCTCA
• Tissue: pods
• Gene name: LI_gene_164956;
• Additional information: details;

Expression of Ll_transcript_437129

FPKM

• PAB: 1.6
• PNAB: 6.7
• PS1: 5.3
• PS2: 4.3
• PS3: 6.4
• PW1: 4.1
• PW2: 3.4
• PW3: 2.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_437129

• Blastp: Pentatricopeptide repeat-containing protein At2g13600 from Arabidopsis with 69.48% of identity
• Blastx: Pentatricopeptide repeat-containing protein At2g13600 from Arabidopsis with 70.39% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT2G13600)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019414287.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;