Ll_transcript_437121

• Id Trinity: TRINITY_DN48906_c0_g1_i2
• Name Transcript: Ll_transcript_437121
• Sequence: CTCGTGGGTATATGGCTAATCCCAATAAATTACGAAGCTGATTACTTGAACGATATAGAATCGAATTATATAGCAACAGAACATTGTTTGTTGCTTTAAC AATAAACAAATAGTAATGTTATATCCTCCTACTAAATCCTCATACTATAAGAGAGAGTAGGAAAGAAATGAGAATGAATAAAGCTAAAAGATGATTACTC GTAGAGATTAGATTGAAGTTGAAGTAGAGAAGAAAGGGATTTGAAGCAATGACTATGAAGATTGCTCCTCGCAGATGATAACATTGATTAGTTGATCTTT GTTTTGTTTGAATCAGAGTTTGCAGCTATAGAAGAAGAAAGGCTTTAGGTTTTTGTCTTCAAGAGTGAATTGAGACAACATTGCCAAGTTTTAAGCTTTT CACTGTGACACACAATTTTTGAGCACTTTTGACTAGATTAAGTGAAGATTATAGAATGGGTAGACATGGAGTGTTGAAAAAAGTGGTAGGTGACCTTTCA TTTCTTGATTCATCACCTTTTGCCAAGCTCTTAGACTCTTGTGTTCGGTCAAGGTCTGTTCTTGAAGCGCGTAACGTTCATGCTCGAATCATTAAGACCC AGTTTAACTCTGAAATCTTCATTCAGAACAGGCTCATTGATGCTTATGGAAAATGTGGTTGTTTGGGTGATGCACGCAAAGTGTTTGATCATATGCCCCA TAAGAACACTTTTAGTTATAATGCGATTTTAAGCTCGTTGGCGAAGGCTGGTGCTGTGGACGAGGCTTTGAATGTGTTTAATTCGATGCCGGAACGTGAT CAGTGCTCATGGAATGCTATGGTTTCCGGTTTTGAACAACATGATCATTTTGAAGAAGCTTTGAGATTTTTCGCTGATATGCACCGTGAGGATTTTGTAC TTAATGAATACTCTTTTGGAAGTGCTCTTAGTGCTTGCTCAGGTTTGAATGATTTGAATATGGGTGTTCAAATTCATGGTTTGATTTTGAAGTCGCGCTA TTCGTTAGATGTTTACATGGGTTCTGCTCTTGTTGACATGTACTCTAAGTGTGGTTTGGTGGGATATGCTCAAAGATCTTTTGATGACATGTTTGTGAGG AATATAGTTTCTTGGAACAGTTTGATTACGTGCTACGAGCAAAATGGTCCCGCTGAGAAAGCTCTAGAGGTGTTTGTAAGGATGATGAATAGTGGGATTG AACCTGATGAGGTTACTTTAGCCAGTGTGGTCAGTGCTTGTGCAAGCTTGTCGGCAATTAGGGAAGGATTGCAAATTCATGCTCGTGTTATGAAATCTGA TAAATTCCGGTATGACCTTGTGTTAGGCAATGCATTGGTTGATATGTATGCAAAATGCAGTAGAGTAAACGAAGCTAGGTTGGTTTTTGATAGTATGCCG CATAGGGATGTGGTATCTGAAACCTCCATGGTTAGTGGATATGCAAGGGCAGCTAGTGTGAAAGATGCGAGAGTAATGTTTACAAACATGACAGAGAGGA ATGTGGTGTCTTGGAATGCACTCATTGCAGGTTATACTCAAAATGGAGAGAATGAAGAGGCTGTTAGTCTTTTCCTCCTCCTGAAGAGGGAATCCATTTG GCCAACCCATTATACCTTTGGGAATCTACTTAATGCATGCGCAAATCTTGCTGATCTGAAGCTTGGTAGACAGGCCCATACTCACATTTTGAAGCATGGG TTGAGGTTTCAGTCTGGAGAAGAATCTGATATTTTTGTGGGGAATTCCCTCATTGACATGTACATGAAATGTGGACTGGTCGAAGATGGATGCCTTGTTT TTGAAAAGATGGTAGGGAGGGATAATGTCTCATGGAATGCCATGATAGTGGGATATGCACAAAATGGTTATGGTACAGAGGCCCTTGAAATTTTCAGGAA AATGATGCTATCTGGAGAAAAACCAGATCATGTTACTATGATAGGAGTTCTATCTGCATGTAGCCATGCAGGACTTGTTGAAGAAGGACGCCATCACTTC CAATCAATGTCCGAACATAATTTAGCACCATTGAAGGACCATTTTTCATGCATGGTTGATTTACTCGGTCGGGCGGGTTGCCTTGATGAAGCAAAAAAAT TGATAGAGACAATGCCAATGCAACCTGATGCTGTTGTTTGGGGATCTTTACTTGCTGCTTGTAAAGTTCATAGAAACATTACATTAGGGAAGTATGTTGC AGAAAAGCTCTTGGAGATTGATCCGTTCAACTCTGGACCTTATGTTCTTCTTTCAAATATGTATGCTGATCTTGGTAGATGGAAAGATGTGACGAGAGTC AGGAAATTGATGAAGCATCGAGGAGTAATTAAGCAACCCGGTTGCAGTTGGATTGAAATAGAAAGTCGTGTGCATGTTTTCATGGTGAAAGATAAAAGGC ACCCTCGTAAGAGGGATATCTATTCATTTTTGAAAATTCTCACACAACAGATGAAGCGATCTGGCTATGTTCCACAAGTTGAAGATGATGAGATTTATGA GGAGGAAAGTGACTCTGAACAAATTTTACATTATGAAATGGAAATGGCTGTAGACGCTGCAGTTGGATAAAATACTTCAACCTTTTTGCTAAGCATTATT TTTAGTGGTGATTCATTTATTGTTGCTAGTACGGATGGTGTGGGAACGAAAGTAATGCTGGCCTTTGAAACTAGAATTCATGATACTATCGAGATTGATC TGGTCGCAATTAGTGTCAATGATATTGTTACTCAAGGAGCAAAGCCACTATTTTTCCTAGATTAATTCGCCACTGGTCACCTTGTTGTTGACATTCCTGA AAAGGTTATAAAAGGCATTGTTAATGGCTGTCAGCAATCTGATTGTGTTCTTTTGGGAGAAGAGACTGCAGAGATGCCTGGTCTATATAAAGATGGTGAG TATGATCTTAGTGGTTGTGCAGTTGGCATTGTGAAGAAAGATTCTCTAATCAATGGGAAGAACATTGTTGCTGGTGCCGTTCTTATTGGTCTTCCATCTA GTGGAATGGTTTCTCACTTGCAAGAAGAGTGCTTGCTCAAAGTGGTCTCTCATTGAAAGATGAAAGGAATGCTCTTTAGTTAATTCTATATGACAACTTC TCATATTAGGCTGGGAATATCGAGGATGCCGAGATAAGACAGACTTTTAATATGGGCATAGGGATGATGCTGGTTGTCAGTCCAGAGACGTCAGATAGAA TACTTGAGGAACAAGATAATACCGAGAAATTTTATCGCGTTGGTGAAGTTACAAGCAACAAAGGAATGCTCTTTAGTTAATTTTGGTATGACTTTAATCA TTTTGTACCTTCCTAATAATACTTTCATGACAAGTTTGCTATGAGAGTTGGGATATTGGGGGCATATTTGGTTTCCTGACATAAATTTTAGGAGTAAAAT GCACTTTAGCACCATGATAATTTCTTCAACCGTAAGGGGAAAAGGGTACCCTTTTGTGTAACACCCTGAGATCTTTCTGAACTGAGCTTTATCTAAAGGC TTCTTGTTCATCAAGATTTCCCATGGCTTCACCTTGCAATTCACATCCTTGAGGACATTCTTAACTCTGCTGAATGGTTTTTGTTCAGCTTTTGCTTCCT CTTCATTTTCTTAGTCATTAAGTTGTGGAAGTTTGCTGAAGATTTTCAAGGTTGCTTTGTTATCTGAATGCTGATCTTGTAGTTGATGCCTTTTTACTCT TTCTTCATTGAATATGTTGTTTGTCTCTTTTCTACCTCTTTGTTTGGATGTGTCTCTTTTTCTTTTCTAACACACTTGGTTCTCTCTTGCACTATTCCAT ATTCTTATTTTAATCCA
• Tissue: pods
• Gene name: LI_gene_164956;
• Additional information: details;

Expression of Ll_transcript_437121

FPKM

• PAB: 0.1
• PNAB: 0.2
• PS1: 0.3
• PS2: 0.3
• PS3: 0.4
• PW1: 0.3
• PW2: 0.3
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_437121

• Blastp: Pentatricopeptide repeat-containing protein At2g13600 from Arabidopsis with 69.48% of identity
• Blastx: Pentatricopeptide repeat-containing protein At2g13600 from Arabidopsis with 70.39% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT2G13600)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019414287.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;