Ll_transcript_436670

• Id Trinity: TRINITY_DN48910_c3_g3_i3
• Name Transcript: Ll_transcript_436670
• Sequence: CAACAAGTTGCAAATTCCGTCCCTAGAGTAGTTCATCCTGATTGGTTGCATAAGAAGGTCCGTGAGAAGGAGGACAAGTTTCGCCAACGAAAACTAGTTG ATCTCTTCCCAAAAGTAAGCCGGGATGAGTGCTTAAAAAGGCATGACGAATCTGATAGTATCCGCCTTGTGAGGGATGAAGAGATGGTTAATGACTTGGA GGACTTCGGAAACAAGACCAAGAATTCTACATTTGGACCTAGACCAATCATACGACATTATGAAGCTAATAATGAACGACATCCTTTGAATGCCAATTGT GAAGAAGGTTTTGACCAGCAACAAAATGATAATAACAGCAATGATCAGCCACTTTCACAAAATGATATATCGTGTGATGATGTGGATAGAACTGTAGATT ATCAAGGATGGCTTCAAATAAAGAAGAGAAAGTGGAAACATATCCTAGAAAGGAGAAAGAAGCGAAGATTGCAGAGTTCTAAGAATTCTGACCGTGTATA TGACACTCTTGAACAAATAAACGGTAAGAATAATCAGGGAAGAAGTAATATCAGTTCATATTTCAGAAGACATGAGGTGCTTCTGACGCAGTACCACTGG CAGATAATACAGCTTGTTCACAGTTCACAGATTGGACAGTTTTTTGCTTGGGTTGTTGTTGATGGGGTTATGGTTAAGATTCCTGTTTGTGTTCCTAGAG TCTTTTACCTCAATTCTAGATCACCAATTACTGAAGAATTTCTGGGCAAACGTGTCAACAAGACTCTTCCTCATGGAAGGCATAGTTATAACCTGTATGA GGTCACAATTAATGAAGTTCAGTTTAGGGAAGCAAGCAAAAAACTTGCAGCTCTTCTTGCTGATCCTGATGTTGAGGGAATATATGAAACCAAGGTGCCA CTGGAGTTCAAGGCTATAATCCAACTTGGTTCTGTATGTAAGGTGGACAAAACTGCTAAAAAACGTAGTCTACAGGACCCATGGAATTTGAGTGAATTGC ACATGAAGACCACAACAGAATGTGTTTATCTCGAAAAGTCCATACAGTTCTTTTACCTCTATCATAGCATCTCTGAGGGACGCGCTATATATGTTGGGTA TTTTCCTGTATCGAAAGTAATAACAGTTGTGGTAGTTAATCCCTACCAAAACAAAGATTTATCACCATCTTTTCTTGAAAGACAATTTCATGATGGCTGC CGAGCTTTGTCTATTGAGGCACCTCCCAGGAATGACATTACTTTTAAGGTGGACTATGTTGGATATGTCAAGGATGCTGAAACAGTAATGCAAAGAGCAA TAGATGATCACAGGAATGAACATCATGGTCCTATGGTTGCTGTCATTGAATGCCCCGATGTTCAACTTGTAAAATTGGGTATTCGAGCGCTAGATGAATT TCCATGCCTGAGTGTACCTTCTAATGCACGTGATAGTCAGTATCAGATTCTTGGATGGCAACAACTTGCTGCAAAAATTGGAATGCAACGTTGTGCCGCG TCAGCCCAATGGCTTAACGAGAGAATTGCTATCTCAAGATATGCGCATGTGCCATTGGGGAATTTCGAACTTGACTGGCTTATATTTACAGTGGATACCT TCTTTTCAAGAGCGTTGCATGATAATCAACAGGTACTTTGGATATCTGATGACGGTCTTCCAGATTTAGGTGGCATCAGTGATGAAGAGACCTGTTTTGT GGACGAGGTCCGCCAACCTGTTTGTAATTTTCCTGGAGCTTATAGAAAAGTGTCTGTGGAGCTTAAGATTCATCACCTGGCTGTGGATGCTCTTCTAAAA TGCAACCAGATTAATGAATTGGAAGGAGGTGCATTATTAGGATTTGACCATGAATTCAATTCTGGAGCAATTTCCATGAATGGTCAGAATGGATTTGATG AGGCTACCTCATGTGCACATGCCCTTCGAGTTCTAAAACAATTGATTCAGCGATGCCTTTCGGATGCAGTTACATCTGGAAATGTATATGCTGATGCAAT ATTACAAAATCTATATCGGTGGCTTTGCAGTCCTCGATCAAAACTTCATGATCCAGCTCTTCACCAGCTACTCCACAAGGTAATGCAAAAGGTCTTTGCA TTGTTGTTGGCAGAGTTCCGCAAGCTGGGGGCAACAATTGTGTTTGCAAACTTCTCAAAGATTATTATAGACACGGGGAAATATGATCTGTCTACAGCCA AAGCTTACTGTGATAGTTTGTTGCGAACCATACAATCTAGAGACCTATTTGAATGGATTGAGCTTGAACCACTGCAGTTCTGGCACTCATTGCTATTCAT GGATCAGCATAACTATGGTGGAATACCAGTAAAATTGGAGGAAGCCATAAATGATGAATCTCAAGTTGACATTATATCGAGCTGGTCTATTGCTGAATAT TTGCCCAAGAAAATTCAGGACCATTTCATTTTCATCGTTTCTCAGTTCTTGTATATGCCCTGGAAGTATGCACAAAAACAAGCAGCAAAAAGGACTTCAT TGCTGAATGATGATGAATCCTGCACCCCATCGATTAACATCGGATCTGCAGAGGCTATTGAATCAGAAATAACGGAGAATATTAAGCAGCAGATCAGCTC TTATTTTGCAGACAAGCTTCTAGGAATTGTTAGCGATATTGTTCTTCATATGAAGGGGACAAACAAATCAGAAAACGACCAGAGTATATCATCTGGCCTT CCTCAACTTGGGGGTGATGTTCATAGAGGGGATGCTGCCTTGGAATTTATCAAGCATGTGTGTGCTGTCCTGGCCCTTGACCAAAGTGTACATCATGATG TTTTGGTCATGAGAAGGAATTTGTTGAAATATGTTCGTGTCAAGGAGTTTGCTCCAGAAGCTGAGTTTCGTGATCCTTGTCAATCCTTCATCTTATCCAA TGTCATATGCAGCTATTGTAGTGACTGCAGAGACTTGGACTTGTGCCGTGACTCGGCATTATTGACTCAAGAGTGGCATTGTGCCGTGCCACAGTGTGGC CAGCCTTATGACCGTGAGGTGATGGAGAATGCTCTACTTCAGATTGTACGACAAAGAGAACGGCTATACCACCTGCAAGATCTGGTGTGTGTCAGGTGCA ACCAGGTTAAAGCTGCACATTTAGCTCAGCAATGTGCATGTGGAGGCTCCTTTAGGTGCAAGGAAGGTGTAAGTGAATTTCGCTCTAAAATGCAGGTTTT CTTAAACGTAGCAATTCGACAGAAATTCCAACTTCTCCAAGAATGCACCTCCTGGATTTTAAAATCTTAGTCATTAAAATTTATAAATGAGTTCCTTGGG TAGGGGAGTTACTATTATTGTGACTAAAACTGTGCAAGTAACAGGATTTAGTGTATACAGCGGGTGATTGCAATTTGCAAGCAAAAAGTTTTCCGCATGA GGGGGGAATCGAATGCCAAACAGGTAGTAAATTTTCAACTATTTGCAGTGATGTAAAAATGTCTATAAAATTATCTTTTCGTTTTTTTTGTGTGGGGTGG GGGGTTGAGTTATGAAATGTTTATCTTCATCAGTGAAACGTATGTGCTATGTGCTCATCATATTAAGCTTAAGTGTCAGAAAGGAGTAATTTAATGCATC ACATAAAACTAAAAAAAAAGGCATGGCGCAGTGCAAAGGCATCACATAAAACTAAAAAAGAGGCATGGCGCAGTGC
• Tissue: pods
• Gene name: LI_gene_164988;
• Additional information: details;

Expression of Ll_transcript_436670

FPKM

• PAB: 0.3
• PNAB: 5.2
• PS1: 3.8
• PS2: 2.7
• PS3: 5
• PW1: 2
• PW2: 1.4
• PW3: 1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_436670

• Blastp: DNA polymerase epsilon catalytic subunit A from Arabidopsis with 56.34% of identity
• Blastx: DNA polymerase epsilon catalytic subunit A from Arabidopsis with 56.16% of identity
• Eggnog: DNA polymerase(COG0417)
• Kegg: Link to kegg annotations (AT1G08260)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019453891.1)
• Pfam: Domain of unknown function (DUF1744) (PF08490.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;