| Id Trinity | TRINITY_DN48913_c1_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_437391 |
| Sequence | CTGAACATTGTCCTTAATCATAGAGAACCACTGTGACTGTGTTTTCTTTTCTTCTTCAAAATGAAACCTATCAACTTTTTTTTAGTAAAGCCTTCACCTT TAACCATTTTTATCATTATTCTCATTCTCTCTATTCTGGGTTTTTATTCTCTGCATTACCCTCATCCTTCTTCATTTTCCCAAAATACCCTTCACTTTCA AAACCTCTTCCTTTCTTCTTCTTCCAACTCCACCGTCTCCACCTACCTCCGCGCCCTCACCGTACACCCTCACCTCGCTGGAACTGAACTCGCCGCTGAC ACCACCGCCTATGTCGCCGACCACTTCCGGGGCCAAGGCCTCGCCACACACACAGTGGATTATACTGTGTTGTTATCTTACCCTGTTTATTCTTCCATTG CAGCGCATTTTAGCAGCGGTTCAGTGACTCATCTTCTGTTAACCGAAACTGACCGGTTCGACGTGGTGAAACCATACCATGCTTACTCACCATCCGGTTC GGTTTTCGCCAAGGTGGTTTTCGTGAACTACGGAAGAGAGAGGGACTACCATGCTCTGGAGGCATTAGGAGTCGCTGTTTCCGGCTGCATCGCGGTGGCG AGGAAGGGAAGTGGAGGAGGGATAGGGCGGGGAGCGGTGGTGGAGAAGGCGGAGGAGAAAGGTGCGGTGGCGGTGCTGATTTACAACAATGATGATGATG GTGGTGATGACACGTGGCGCAAGGGGTTTGAGAGGGGTCACGTGATGAGAGGTGGGGTGGGGGACCCACTTAGTCCAGGTTGGGCTGGGGTTGAAGGAAG TGAGAGATTGGGGTTGGAAGATAGTGAAGTTTTGAAAAAGTTCCCAAAAATTCCATCTTTGCCCTTGTCTTATGAGGTTGCAGAGACTATTTTGTCCTCG CTTGAAGGTACTTCTGTGCCCTTAGAATGGAAGGGTACCCTAGGGTCTAAGGTTAGGAATGTTGGTCCTGGTCCCACTATGCTCAATTTCACTTACCAGG TTGGTGTGTTAAATGTTACTTACTATATTAACGTGTGTTGCGTTGTGCTTTTTGATGGTGGCATTTGTTTTTATCTTGAGACTTGGGTTATGTTTGGATA TTTGATGGGTGGAATGAAATGAGTGTGTCTTTTGCTTTTCAATGGTGCCATTATTCTGTTTGGAGAAATGTTTTTTATTTATTACCATATTGCCATTTCA ATGGTCCCTCAGTGTTTTTCAGTCAACATTTGATTTATGTGAGCAAGGTTGGGTAAGACCTTTTATGGTAGGTGATCCACCCCTTCCCTCTTCAATATAT TGTGTAAAATTAGTGTGTGTGTGTATATATATATATACATAGATAGATACCTTACTGAATTTGTTTGCAAGTGTAGCTTGATATTGAGCTTGTGCATGTT TCGGGATAGAGTATCGAAAAAATGTGAGTTTTTGTCACATTTGTTGTGCCTAAAGCTTTTCCAAATTTGAAAAATCTGGTAGGCGGTGTTCCTTTGATGA TTGAAACTTGAAAGTGTTAGAGATGGTCTGGTTTTGGCCAAAATTATTGATCTTCTGTTTAAGTTTGAGCTGAACTACAGTGCTACACACTCTGATCATG ATATATGGGTGAAAATAAGATGGCCACCATTCAAAATGTTTTTGCCGTCATAAAGGGATCAGAAGAACCTGATCGCTATGTTCTGCTTGGGAACCATAGA GATGCGTGGACGTATGGCGCTGTTGATCCCAGTAGTGGGACAGCAGCCCTACTTGAAATTGCGCGTCGATACTCTATTCTATTGAGTTCGGGATGGACAC CGAGGAGGACAATCATTCTCTGCAGTTGGGATGCGGAGGAATTTGGAATGATAGGATCTACTGAGTGGGTTGAACAAAACCTTGTCAATTTGGGTTCCAA AGCTGTAGCGTACCTTAATGTGGACTGTGCTGTTCAAGGGCCTGGTTTCTTCGTTGGCTCTACTCCCCAGCTAGACAATCTTGTTGTTGAAGTCACAAAA AAGGTCAAAGATCCTGATAGTGAGGATGCATCAGTATACAAGAATTGGGCTGCCGCTGGTGGAGACTCCAATATTCAGAGGCTGAGTAGAGTTGATTCTG ATTTTGCTCCGTTTGTGCAACATGCAGGGGTTCCATCTATTGATATCTATTATGGAAAAGAATTTCCTGTATATCACACTGCTTTTGACTCCTATAACTG GATGACACAGCATGGAGATCCATTCTTCCATCGCCATGCTGCCGTTGCTGGAATTTGGGGACTTCTAGCTCTTCACCTGGCCGATGATTCCATTCTTCCT TTCAATTATGTTCCATATGCAAATCAGTTACAGTTGTACATAAACATTTTGAGCAGCTTGTTAGACCAGCAAATTTCTCTACATCCATTGAATGTGTCAA TTCAAGAATTCGCTTCGGCAGCCAAGGAAGCTAAAGATGAATCAAAGGTAAAATAAAAGTGGCTGCAATTTGTTGATATCTACTAATGCTATAGCTACTC CTGCTTTTTATTCATTATCAAATCCGTATATACTTGTCTTTGTTTTGAACTGCAGAAACTGAGATTACAAGAAACA BLAST |
| Tissue | pods |
| Gene name | LI_gene_165013; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_437391
| Blastp | Probable glutamate carboxypeptidase PLA3 from Oryza sativa with 66.67% of identity |
|---|---|
| Blastx | Probable glutamate carboxypeptidase PLA3 from Oryza sativa with 67.78% of identity |
| Eggnog | peptidase m28(COG2234) |
| Kegg | - |
| CantataDB | Link to cantataDB annotations (CNT0000376) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019426396.1) |
| Pfam | Peptidase family M28 (PF04389.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |