| Id Trinity | TRINITY_DN48913_c2_g2_i5 |
|---|---|
| Name Transcript | Ll_transcript_437409 |
| Sequence | TGTAGACTTATTTTCCTCCATGTTTGAACATAATAATGTTAAGAATGATAATAATGGAAAGAACACAGAAGAGCATTAGCACATAGGGGTTTCTTCTCAG ATTGGAATTGCCTGCCATACTCATTCTCGCTTACTTTCTGTGACCAACATTCAACAACAACAACAACAACACAATCTCTTCGAAGCTACCAACATCATTG TCTCTCTCTCTCTCTCTCTATATATATATATATATACGTGTGTGTGTGTGTATTTCTCTCTCTCTCATACCCCTGCGTCCAATTCCTCTTCTTACCCTCT ACCATATAATATAACAACCACAATCTTAAGACATGTATAGATATATTTTCCCAATATTCTATTGATTACTTTCTTCTACTTCGCTTCTTTGCTTTTTGTA ATTGTAAATGGCCAATGCATCTGGCTTCTTCACTCCTTCGCTTCCCAACTTCAGATTAAGGGTTCAAACGTTCATGGGTATTCACACATTTCAAGGATTT CCCTCCAAAGTTCTTTGCTTTGCTGCCATTCAAGGTGCTCATAAAACTACTTCTCCTTCCGAATCTCGCTTACCCAGGCTTGTCAGTCAAGGCTGCAAGT TAGTTGGATGTGGTTCTGCTGTTCCATCTCTTCAAATTTCCAATGATGACCTTTCGAAGTTCGTTGATACTTCTGATGAATGGATATCTACTCGCACTGG GATCCGTAGCCGGCGAGTTCTTTCAGGTAAAGATAACTTGACAAATTTAGCGGCAGAGGCAGCTAGGAAAGCTCTTGAAATGGCGAAGGTTGACCCTGAT GATCTTGACCTAATATTGATGTGCACATCTACACCGGAGGATCTTTTTGGTAGTGCTCCACAGGTATGGGTTCAGGGTGTCACATTGAGAAACATTCTTC TATTCTATTTAACCTTAGCAAAGTAATCTGTATTTATAATTTACTCATTTAAAGTGATTAATGAATCGAATAGTAGTGCAGTGCAGTTATGATGTTTCAA ACACGCTCTTGCATGTGATTGAGTATTGTCCTTATTACTGTACTCTTCCTATTTTCATTCCTTTATCCTCTCTTATCACTTTTATTGTCCTATGAGTTTC AGATTCAAAAACAACTTGGCTGCAAAACAAATCCATTGGCTTATGACATTACTGCTGCATGTAGCGGATTTGTGTTAGGTTTAATATCAGCTGCTTCTCA CATTAGGGGAGGTGGATTTAAAAATGTTCTAGTTGTCGGGGCTGATGCTCTTTCACGATATGTTGATTGGACAGACAGAGGGAGCTGCATTCTTTTTGGA GATGCTGCCGGTGCTGTACTAGTACAGGCCTGCAACAGCGAGGAAGATGGTTTATTTGGTTTTGATTTGCATAGTGATGGCAGTGGTCAAAGGCATTTGA ATGCTTCCATTAAAGAAAACGATTCAAATAATGCATTGGATTCTTCAAACGGTTCTGTGTCAGACTTTCCTCCCAGACAGTCCTCATATTCTTGCATTCA AATGAATGGCAAAGAAGTTTTTCGCTTTGCAGTACGATATGTGCCACAATCAATTGAGTCCGCCCTTCAAAAGGCGGGTCTTCCTGCATCTAGCATTGAT TGGTTACTTCTCCATCAGGCAAACCAAAGAATTATTGATGCAGTTGCCACTCGGTTAGAAGTTCCATCAGAACGTGTGATATCAAACTTGGCGAATTATG GTAACACAAGTGCAGCTTCAATTCCCTTGGCTTTAGACGAAGCGGTTCGAAGTGGAAAGGTTAAGGCAGGTCAAATTATTGCAGCTGCCGGCTTCGGTGC TGGTCTTACGTGGGGTTCAGCTATTATTCGCTGGGGCTGAGAGCTCATCTTTCAGGGAAAATAGAGAAACTCGGGGGCAAGTTCAGCTGTCCAAATACGT TTTTAGAAATGGGGTTTTGGGAGGTTGCAGTGTGAGAACAATAACATGCAGCACTCCCTCAACTTTCTATTTTTGGTCTTCATTTTCTTAGTCTTTTTTG TCTTCTTTTCTCAAGTACCAATTTTCTTTCTCCTGATAGATATATTTGTCATTCAGATTGATTCTAAAAGAGGCTTCTATTTATGTTTGTCAACAGTACT TGTAATTTTAATGCAGCATGTGAAAGTGTATGCATGCTTGAACTCAAATAGCAATATTGGTAACAAGCAGTGACTTAATTTAATTTATGGGTTTCTTATT TGTTTAAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_165015; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_437409
| Blastp | 3-oxoacyl-[acyl-carrier-protein] synthase 3 A, chloroplastic from Cuphea with 59.09% of identity |
|---|---|
| Blastx | 3-oxoacyl-[acyl-carrier-protein] synthase 3 B, chloroplastic from Cuphea with 84.96% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019436161.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |