Ll_transcript_436770

• Id Trinity: TRINITY_DN48917_c0_g1_i3
• Name Transcript: Ll_transcript_436770
• Sequence: TGAGTGTTCAAATTTGTTAGAGAGAGAATGATGAATGCCGAAAGTGGCTAGTTCATTGCATACTACCAAAATAAAATAAAGCTACAAGAGAGAGAATTCT GAGAGATAACTGGAGCATTTGAGAAATTGAAGAACCTCCACCTAATCATGTCTCTTATTCACTTACCAAATCTCAATCAAAGGAAAATCGTTGGCCATTA TGAATGTACGTAGAGCGATTCTGATGGAAGAGGAAAGAATGAGGTTTAAGTCTAAAACTTTTGGATTTCAAGCTGGTATGATAATTTATCACCTTTTCTT TTTTAATTGCTCTTTTTAGCCGACACGATCCGGTGAGATAAAGACTTGATTATTGTTGTTTTTAATTTGTATTTTTTTAGTGTGTCAATTTGATTGATGA TGTCTGTTTGGCTTTGGTGATTAGTGAGACTGTCAAAATTGTTTGTATGATGTTTATAGGTGATTAGGCATTTTCAATTGTTGTTGAGAGCCATGACATG ACTTCTTTGGATTTAACTTAATAGAAATTTGTTTGGCTTCTCTACAAAATTATATGCTTTCTTTGAAGGTAAACTTGCTACTGCAACTGCCATAACTTAT AGAATTTGAATGTTGTTAGACTCACAAATCACTCAACACCCGAGTGTTTATAACCGCTCAAGTGTTTGAACTCTAACTTTTATAAACAGTTGGGTGTTCT GTATTTGCAAATGCCTGATAGTTTCCTAGCATTCTGCTGTATCATAATAGTTGATAATTTATACATTAATCTCTATAAGTGAATTTGTTTTAGCATTCCC AAGACAGTGGTGCATGTTTTAATTGGGTTGTCTGTTGCATTGGTTTAGTTCTCAATCATGTGATTAATCATTTTGGTTTACTGAGAATAGCGTGTATAGG TATTAGGTACAAGTTATTTATTACCATGTCCATTAGATAATAATAAGCAATTTAGAAGTTGCATCTATACACTAACGCCAATAAATTCGAACTTTAGACC AAACCCATGATTGAGATTCATGGTTTTTGCTGAAGTATTTGTGCTTTTAGATGCACACAATGAAAAGCTTTGCTTAATTGAGATTATTGTGTAGGTGTAA ATTACTTGGTTGGGTTCCTGTAAAAATGTTAACATGTAAAAAATGCTTCATATCTGGGTTTTTTAGTTGCCCTGGTATGGTAGCACATACAACTAAGCTT TTAGCTCTAGGTTTTATTCAGATTGAAGTTAAAAAAATTCTTATTCACTTGCTGGAAAGCCAGGCTCCTCCGAGCTCTCAATTAGCAGGATTCCTAGCAA GACTCTCTACTGTTGCATAGGTGAACCTCGGCGCGATGGCAAGGTTTCTCGCCTTTTTATCCAGAGGTCACCAGTTCAAATCTTAGAAATATCTTCTTTG CTTGCGAGGGTAAGGTTGTGTAAATCTACCCTCTCCAGATCCCACTAGGCGGGAGCCTCATGCACCGGGCCACCCTTTTAGTATGCTTTATACATTTCCG CAACTGATGTAGAAGTAGAGCTATAGCTTTATCGAGTAATAGGAATCAACCATGACTTAATTCATAAATTGATGCACCAGAAATCAATGATGGGTAAGTA TGTGTAGCAATGAAGAGTGATGAGATCGTTAGATTTGTTTTGGTTCCTACTAAATGCATGGGTAAATATGGGCAACTGTTATCTTAAACTACGTAGTTAA TAGTGTGGCAAATTGCAACTGGTTTCATAGCCCATCACAGGTGCTATTGCAGCCTATCAAGGGTGCTATTGTGGCCCATCATGGCCCTACCTTGAACAGA GTGTGAAAACCCATTATTATCCCTGCTATTTGGCTATTCCTCTCATTTATTTCAGATTTTTTGCCATTTTGCCACCCTCAACTAAATCTGAATATTAGGG TTAGAAGCTTTCGTCATCTCATCCAGCAGCCGGGCTTTCTCTCTCGCTCTATTCCCCTTGTTCCAGCTAGTTTCCAACCTGTTTCAGTGATTTCAGGTTA GTTGATTTTTGGATAAGCTGGGATGGGTTTCACCACTCATATAATCACTGTTGCAATTGGGGAAGACATTGCAGAGAAAATTATCTCATTTTCTCAGCAG AGCCCTAAAGGCACAGCAATTTGTATCTTGACAGCCAACGGTGCTGTGTCGACTGTCACGGTTCGTCAACCTTCAACAGCAGGTGGCACTGCCATATATG AGGGGAATTTCCAGATCGCGAGCCTTAAAGGGTCATACTTGCCTACTGATAGTGGTGCCTCCCAATCTGGTGGGCTAAGTATCTTGTTTTCTTGTCCTGA TGGCGGTGCCATTGGTGGAGTAATCGGTGGCGTGCTCATTGCTGCCAGCGAAGTTCAGGTTATTATTGGGAGCTTCGAATATGGAGGATCAAAGGCAAAG AGAAAGAAGATTTAGAATGCACAGTTGCGGTGAACATGAGGGATATTCTGCCACATAACTTCTATTTGGCATATAATCATGTTATTTCTTCTGCCAAATT CATACAAATACTTCTTTTCATAGAAAAAAAGATTGAAGGGAGAGGCCTATTTTTAATATCATACTATGTAATGAGTCTCAATGAGAACTTAAGATAATAT TTAGAGAAAAATCTGTTGTAGCTACTTATGGAAAATGGTCATGTAAATTGCTGTAGTTAACTTTGTAAGCAAAATGCCCTTTATTTGACTCACTTGATGT AGAGCTTATTACTTTGTGGTTCTCTGGCCAATCTGTGTAATCCATAATTTGTGAGTTTGAAGTATGTTAATTCCTTTTGACATGAGATACACAGTTTAAT TCGCG
• Tissue: pods
• Gene name: LI_gene_165059;
• Additional information: details;

Expression of Ll_transcript_436770

FPKM

• PAB: 4.3
• PNAB: 0.7
• PS1: 1.6
• PS2: 2.3
• PS3: 2.8
• PW1: 1.8
• PW2: 1.5
• PW3: 2.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_436770

• Blastp: AT-hook motif nuclear-localized protein 1 from Arabidopsis with 52.24% of identity
• Blastx: AT-hook motif nuclear-localized protein 1 from Arabidopsis with 52.21% of identity
• Eggnog: AT hook motif domain containing protein, expressed(ENOG410YFD3)
• Kegg: Link to kegg annotations (AT4G12080)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019460602.1)
• Pfam: Domain of unknown function (DUF296) (PF03479.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;