Ll_transcript_436772

• Id Trinity: TRINITY_DN48917_c0_g1_i5
• Name Transcript: Ll_transcript_436772
• Sequence: TGAGTGTTCAAATTTGTTAGAGAGAGAATGATGAATGCCGAAAGTGGCTAGTTCATTGCATACTACCAAAATAAAATAAAGCTACAAGAGAGAGAATTCT GAGAGATAACTGGAGCATTTGAGAAATTGAAGAACCTCCACCTAATCATGTCTCTTATTCACTTACCAAATCTCAATCAAAGGAAAATCGTTGGCCATTA TGAATGTACGTAGAGCGATTCTGATGGAAGAGGAAAGAATGAGGTTTAAGTCTAAAACTTTTGGATTTCAAGCTGGGTTAGAAGCTTTCGTCATCTCATC CAGCAGCCGGGCTTTCTCTCTCGCTCTATTCCCCTTGTTCCAGCTAGTTTCCAACCTGTTTCAGTGATTTCAGGTTAGTTGATTTTTGGATAAGCTGGGA TGGGTTTCACCACTCATATAATCACTGTTGCAATTGGGGAAGACATTGCAGAGAAAATTATCTCATTTTCTCAGCAGAGCCCTAAAGGCACAGCAATTTG TATCTTGACAGCCAACGGTGCTGTGTCGACTGTCACGGTTCGTCAACCTTCAACAGCAGGTGGCACTGCCATATATGAGGGGAATTTCCAGATCGCGAGC CTTAAAGGGTCATACTTGCCTACTGATAGTGGTGCCTCCCAATCTGGTGGGCTAAGTATCTTGTTTTCTTGTCCTGATGGCGGTGCCATTGGTGGAGTAA TCGGTGGCGTGCTCATTGCTGCCAGCGAAGTTCAGGTTATTATTGGGAGCTTCGAATATGGAGGATCAAAGGCAAAGAGAAAGAAGATTTAGAATGCACA GTTGCGGTGAACATGAGGGATATTCTGCCACATAACTTCTATTTGGCATATAATCATGTTATTTCTTCTGCCAAATTCATACAAATACTTCTTTTCATAG AAAAAAAGATTGAAGGGAGAGGCCTATTTTTAATATCATACTATGTAATGAGTCTCAATGAGAACTTAAGATAATATTTAGAGAAAAATCTGTTGTAGCT ACTTATGGAAAATGGTCATGTAAATTGCTGTAGTTAACTTTGTAAGCAAAATGCCCTTTATTTGACTCACTTGATGTAGAGCTTATTACTTTGTGGTTCT CTGGCCAATCTGTGTAATCCATAATTTGTGAGTTTGAAGTATGTTAATTCCTTTTGACATGAGATACACAGTTTAATTCGCG
• Tissue: pods
• Gene name: LI_gene_165059;
• Additional information: details;

Expression of Ll_transcript_436772

FPKM

• PAB: 5.6
• PNAB: 2
• PS1: 3.4
• PS2: 1.8
• PS3: 5.8
• PW1: 1.4
• PW2: 1.9
• PW3: 1.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_436772

• Blastp: AT-hook motif nuclear-localized protein 1 from Arabidopsis with 52.24% of identity
• Blastx: AT-hook motif nuclear-localized protein 1 from Arabidopsis with 52.21% of identity
• Eggnog: AT hook motif domain containing protein, expressed(ENOG410YFD3)
• Kegg: Link to kegg annotations (AT4G12080)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019460602.1)
• Pfam: Domain of unknown function (DUF296) (PF03479.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;