Ll_transcript_436630

• Id Trinity: TRINITY_DN48919_c0_g1_i13
• Name Transcript: Ll_transcript_436630
• Sequence: ATACACATAAATTCTTTTGAGCTACCTTTTCAAAAATAAATATCTTAGATCGCGAGGGCACTCGCGCGGAGGAGTAAGAAACCCCAAAAGAGTGAAGCAG AGTGAGAGAATCGAGAACCCTAATCATATCATCATAACTTGTGAGCCAAATCAACATTTTGTCTAGTTTTGATTTAGCTAACTAACAACAATGGATGCTA TAAGGAAGCAACTCGACGTGTTAATGGGCGCAAATCGCAATGGCGATGTTCGAGAAGTTAATCGCAAATACTACGATCGCGATGTTTGTCGCCTTTACCT CGTTGGTCTTTGTCCTCACGAACTCTTTCAACTCACCAAAATGGACATGGGTGCTTGCCCTAAGGTTCACTCCTTGCAGTTAAGGAAAGAATACGTGGAA GCAAAAGCGAAAGGGATTGATAATTATGATAGGGAATTGGAGGACGTTATAGATAGGCTCATCGCCGAGTGCGAAAGGAAAATTGGCAGAGCTCTGAAGC GCCTCGAGGATGACGATGCCAAAGCTGCAATCGCAATATCAGTGACTGAAGTTACTCAGACGCCTGAGGTGCTTGAGTTGTCAAAGGAAATCAAGGAGAA GTTGAAAGAAGCTGATCAATATGGTAATACTATCACTCATGTTAGTTAGAATCGTATAATACATATTCGATGCGGTTTTCATACAAAACAGTGCTTATTG AGTGGTCCATTGTTTTCTGCTCCTGAATTGTGGACGGAATCTCACTGAAACGTAGCTGGAATTATGTATCGCACGATTCTAGCTGTCACGGGTTGCCTAC CGGTTTGAGTGGGTCACACATGACCCTGTTTCTAAAACCCTAAAATTAACACTTTTTAAATGCCACTAATGGGCCGTTTTACCTTGTCTATTTAGCCCAA ATTCATTTTCAAGCCCCCAATCTGAATAAAAAGCGCGAATAGCTGCAAAACCTAGCATTTTGTGTAACAGTGGCTGGCAGTGAAAAGTGAAAATGTGAAC AGTCGGGGGAAAACGTTTCTACACGGAACAGTGCCGGTGCCTTTCCCTCTGCATCCTTTTCCATTTCTTCTCTATGCGGAACAGTGCAACCGTGCATGTT ATTTTGCTATCCTTTGGTGTTAATTTTCTATTTTGATTATACACTTATGACTTGGAACTTGTGGATATTAAGTCATAATAATTACATTTAACTTGCTATC TTATTTCCTATTATGACTTATGGATTATGAATTTATGATACGTATGACCCTTATGGCTTATGTTATGATTTTTTTTTATTATGTTTATTTATTGACCATG GATCTGACAATTGACAATACAATTCATGATTCGGAAAATAGTTCTAATGGTTAAAGTACAATTCATGATACTAATTACCATGCTATCACTAAGTAAACTT TTTTGGCTTTTAGATGATGTTCCATTTTTGTTCCTAAGCTTGAAGAAAAGAACATGGAAGGGGATTATACATGACATGGATCTGTTATTGGTGTTTGTTT TATTTGATATTATCCCATAATTATCCCTTTCTCAAATTGTAGCATTTGCATATAGGTTGAATGCGCATGTTGGACTGAATGTCACATGAATGGCTACTGT TGTTTTTCTGCCACTGGTTCCTTGATAACCTATTTTTCTAGACTTCTAGTCCAAGTTTCAGATTGCAAGAACTTAGAGTATGTAAAATTGTTTACCGAGT TTCAACATGATTAGACGAGATTTAATATTATTTGATATTTGATTGGAGAGCTTGATTTCACACCCAAAAGTTATTACGAAAATATAAAAAATTCCAGTTA AGATATTTCATCAGTTTTTACCTTCCATCATTTAGCTGATGTGAGCAGGGTTTTGGTTTGTTAAATCATGTGGAAAGAAATCAAGCTATCGAAGTATTTA AACTTGCTTGCATTACAATTGTGTGAATTTTTTTATCCTGATATACATGAATTCATACGTGATATTATACCCTTTTTGAAGTTTTTTGACGCATTTATTT ATTTCACTTGTGTATAATAATATTGGATTTTCAGATCTTGAAGGCAACACAGATCTCAAGATCCGAGCTATGGAAATTGTAGAGGAACTTAGGACTAAGA GAGCTGACAATCAGGCTACACTTCTTCTTGATGCCTTCAACAAAGATAGAGCATCTTTACCTCAACCTCTTCCAAATCCACCGCCATTGGCACCCTTTCC TGTAGTTCCCCGTGATGCTCGAACACAGGAGATGATAAATGAAAAGTTCAAGAAGGCTGAAGAACTTGGTGAACAAGGAATGGTTGATGAGGCACAAAAA GCATTGGAAGAGGCTGAAGCACTTAAGAAGCTCCCTCCAAGGCAGGAGCCACCATTGGATCCTTCTAAGTACACAGCTGCAGATGTTCGCATTACTGATC AGAAGCTACGTGTGTGCGACATTTGTGGGGCATTTTTGAGTGTTTATGACAGGCTGTTGTGCCAGTTTTACGAGGATAACTTTTGCAGCTAAAGAATTGA TCGCCGACTAGCTGATCATTTTGGAGGGAAACTTCATTTAGGGTATATGCAGATTCGTGAGAAGTTAGCAGAACTTCAAGTAAGACACTGTTCAGCATTG TTGTGTAACTATTCTATTCTGCAACTGGTTCTTAAATATGTATTTCATATTTGATACCGAGAAAATGTTAGGATTTGCCAGTTGGTTGTTCACAAGATGA CTCCCTAAATAAAGCCTCTGTTTTGATCACATTCCTTGCTAATGCTTCCATCATTCATGAAATATATATAGTCATATCATCTCCTTATCTTGCATTGTAT AGAGAAGGAAAAATCAATGTTGTCGAGTGTATTAAGCTATCCTTTATGCTCATCTTTTAAATGCCCTCCAACGTCTGAATATGTTGGTTCAGGTGCTGGT GTTTATTTCACCTAGTTCTAAACAGATTCCCAATTAGCACATGATGTGAGTTCTCTAACCTCAAAGAAAAATGGTTTTTCTTGTGTCTCGATGTTATCCT TCCTTTGCTAATAAGTAATAGCTAAACTTTCAATTAGGTCTGAATTCTGGAAGCATGCATACTTTTGAATGGGTGCACTTTTTGATGTTTGATGTGGCAT TGTATATGATGCTGCACTTATTAAGTTAGTCAAATATCTTATCCTTACCAATTACCAATATAATGTGAAGAGAATGGAAATATGTTTCAGATTGATGTAT CTCGGTTCTAGTCGAGGGATTACATTTGCATCCATCAGTGATAATCATACCTGTCATAGCAAGTTTGTCACTTTGCGCACCCAGTTATTTGCCATACATA GCGTTACGGGAGACGTTGGGAGTAATTGTTTGTCACTTTTGGTTTGTTTTGTTGTTCAATATCAAAAGAGATTCTTTTTTCTTCTATTGTCCATTCTATA TCTTATTTCTGATTATTTCAAAGTGTCGTGCCATCCATAGGCAAATGAAGAATCGAAAGATACAACATGTGAGGTTGACTTCGTATGGCCAGGGGTTTTT GTTTCTGGGCATGTCTGTTGTATTTGTGTATTTTTTTATCCATTATTTATTAACTTTTGGTTTTATTGGGTAGAGGAAGGATTTCATACTGTTTTTTCTG ATTCAGGAAGAAAGGAACAAGAGCCGAAGGACTGATCGGCATGATGACAGGAGATCAAAAGAACGGAGTAGGGA
• Tissue: pods
• Gene name: LI_gene_165073;
• Additional information: details;

Expression of Ll_transcript_436630

FPKM

• PAB: 0
• PNAB: 0.6
• PS1: 0.3
• PS2: 0.5
• PS3: 0.7
• PW1: 0.1
• PW2: 0.4
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_436630

• Blastp: Putative RNA-binding protein Luc7-like 1 from Mus with 37.84% of identity
• Blastx: Luc7-like protein from Dictyostelium with 42.2% of identity
• Eggnog: S. cerevisiae(COG5200)
• Kegg: Link to kegg annotations (66978)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449852.1)
• Pfam: LUC7 N_terminus (PF03194.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;