Id Trinity | TRINITY_DN48919_c0_g1_i16 |
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Name Transcript | Ll_transcript_436634 |
Sequence | GTTGAAAGAAGCTGATCAATATGATCTTGAAGGCAAGATGGATCTCAAGATCCGAGCTATGGAAATTGTAGACGAACTTAGGACTAAGAGAGCCGACAAG CAGTCTACGCTTCTTTTAGATGCCTTCAACAAAGATAGAGCATCTTTACCTCAACCTCTGCCAAATCCACCGTCATTGGCAGCCATTCCCTTGGTTGCTC CCGATCCTCAAACTCAGGAGTTGATAAATGAAAAGTTGAAGAAGGCTGAAGATCTTGGTGAACAAGGAATGGTTGATGAGGCACAGAAGGCATTGGAAGA GGCTGAAGCACTTAAGAAGCTTCCTCCAAGGCAGGAGCCACTATTGGATTCTTCCAAGTATACAGCTGCAGATGTTCGGATTACTGATCAGAAGCTACGT GTGTGCGACATTTGTGGGGCATTTTTGAGTGTTTATGACAGTGATCGCCGACTAGCTGATCATTTTGGAGGGAAACTTCATTTAGGGTATATGCAGATTC GTGAGAAGTTAGCAGAACTTCAAGAAGAAAGGAACAAGAGCCGAAGGACTGATCGGCATGATGACAGGAGATCAAAAGAACGGAGTAGGGACAGGGAATC AAGTAGGGACCATGAAGGTCGCGAGAGTCATGAACGAGGCCGAGACTATGATCGCAGGAGCAGGGATCGTGATAGGCATAATGATAGAGACCGTGGTTAT GATCGTGATCGTGACAGGGACTCTGATCGCTCTCGACCCTATGACTCAAGAAGTCGCCGGAGGTCCCGCTCGCGATCTCGTGAGCGTTCTAGAGACTATG ATCGTCATAGGCGTCACGATCGGTACTAGAAATTGCTGTGGATCTTATGAATATGATAAGATATTTGATGTAGGTGGGTGATGAACCTCATGTTGGACCT ATAATTTTGTTATTTCTTGTGTTAAGTTGTTTTTCTAATGATTTATATAACTGGAGCTTAGGTGTAACTAAATTGTGTTTCATCTTGCTTTGAAGT BLAST |
Tissue | pods |
Gene name | LI_gene_165073; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_436634
Blastp | Putative RNA-binding protein Luc7-like 1 from Mus with 47.01% of identity |
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Blastx | Putative RNA-binding protein Luc7-like 1 from Mus with 49.12% of identity |
Eggnog | S. cerevisiae(COG5200) |
Kegg | Link to kegg annotations (66978) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019434236.1) |
Pfam | LUC7 N_terminus (PF03194.14) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |