| Id Trinity | TRINITY_DN48919_c0_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_436623 |
| Sequence | CAACCTTAGGTTTTGATTTGATAAATTTCCAAGATCACTCGAAAAGAGAGAGAGAAGAAGAAGGAGAGTCCAAAACCCTAAGAATGGATGCCATAAGGAA GCAATTGGACGTGTTAATGGGAGCAAATCGGAACGGTGACGTTAGAGAAGTGAATCGCAAATACTATGATCGTGATGTATGTCGTCTCTACCTCGTTGGT CTTTGTCCTCACGAACTCTTTCAACTCACCAAAATGGACATGGGTGCTTGCCCTAAGGTTCACTCCTTGCAGTTAAGGAAAGAATACGTGGAAGCAAAAG CGAAAGGGATTGATAATTATGATAGGGAATTGGAGGACGTTATAGATAGGCTCATCGCCGAGTGCGAAAGGAAAATTGGCAGAGCTCTGAAGCGCCTCGA GGATGACGATGCCAAAGCTGCAATCGCAATATCAGTGACTGAAGTTACTCAGACGCCTGAGGTGCTTGAGTTGTCAAAGGAAATCAAGGAGAAGTTGAAA GAAGCTGATCAATATGGTAATACTATCACTCATGTTAGTTAGAATCGTATAATACATATTCGATGCGGTTTTCATACAAAACAGTGCTTATTGAGTGGTC CATTGTTTTCTGCTCCTGAATTGTGGACGGAATCTCACTGAAACGTAGCTGGAATTATGTATCGCACGATTCTAGCTGTCACGGGTTGCCTACCGGTTTG AGTGGGTCACACATGACCCTGTTTCTAAAACCCTAAAATTAACACTTTTTAAATGCCACTAATGGGCCGTTTTACCTTGTCTATTTAGCCCAAATTCATT TTCAAGCCCCCAATCTGAATAAAAAGCGCGAATAGCTGCAAAACCTAGCATTTTGTGTAACAGTGGCTGGCAGTGAAAAGTGAAAATGTGAACAGTCGGG GGAAAACGTTTCTACACGGAACAGTGCCGGTGCCTTTCCCTCTGCATCCTTTTCCATTTCTTCTCTATGCGGAACAGTGCAACCGTGCATGTTATTTTGC TATCCTTTGGTGTTAATTTTCTATTTTGATTATACACTTATGACTTGGAACTTGTGGATATTAAGTCATAATAATTACATTTAACTTGCTATCTTATTTC CTATTATGACTTATGGATTATGAATTTATGATACGTATGACCCTTATGGCTTATGTTATGATTTTTTTTTATTATGTTTATTTATTGACCATGGATCTGA CAATTGACAATACAATTCATGATTCGGAAAATAGTTCTAATGGTTAAAGTACAATTCATGATACTAATTACCATGCTATCACTAAGTAAACTTTTTTGGC TTTTAGATGATGTTCCATTTTTGTTCCTAAGCTTGAAGAAAAGAACATGGAAGGGGATTATACATGACATGGATCTGTTATTGGTGTTTGTTTTATTTGA TATTATCCCATAATTATCCCTTTCTCAAATTGTAGCATTTGCATATAGGTTGAATGCGCATGTTGGACTGAATGTCACATGAATGGCTACTGTTGTTTTT CTGCCACTGGTTCCTTGATAACCTATTTTTCTAGACTTCTAGTCCAAGTTTCAGATTGCAAGAACTTAGAGTATGTAAAATTGTTTACCGAGTTTCAACA TGATTAGACGAGATTTAATATTATTTGATATTTGATTGGAGAGCTTGATTTCACACCCAAAAGTTATTACGAAAATATAAAAAATTCCAGTTAAGATATT TCATCAGTTTTTACCTTCCATCATTTAGCTGATGTGAGCAGGGTTTTGGTTTGTTAAATCATGTGGAAAGAAATCAAGCTATCGAAGTATTTAAACTTGC TTGCATTACAATTGTGTGAATTTTTTTATCCTGATATACATGAATTCATACGTGATATTATACCCTTTTTGAAGTTTTTTGACGCATTTATTTATTTCAC TTGTGTATAATAATATTGGATTTTCAGATCTTGAAGGCAACACAGATCTCAAGATCCGAGCTATGGAAATTGTAGAGGAACTTAGGACTAAGAGAGCTGA CAATCAGGCTACACTTCTTCTTGATGCCTTCAACAAAGATAGAGCATCTTTACCTCAACCTCTTCCAAATCCACCGCCATTGGCACCCTTTCCTGTAGTT CCCCGTGATGCTCGAACACAGGAGATGATAAATGAAAAGTTCAAGAAGGCTGAAGAACTTGGTGAACAAGGAATGGTTGATGAGGCACAAAAAGCATTGG AAGAGGCTGAAGCACTTAAGAAGCTCCCTCCAAGGCAGGAGCCACCATTGGATCCTTCTAAGTACACAGCTGCAGATGTTCGCATTACTGATCAGAAGCT ACGTGTGTGCGACATTTGTGGGGCATTTTTGAGTGTTTATGACAGGCTGTTGTGCCAGTTTTACGAGGATAACTTTTGCAGCTAAAGAATTGATCGCCGA CTAGCTGATCATTTTGGAGGGAAACTTCATTTAGGGTATATGCAGATTCGTGAGAAGTTAGCAGAACTTCAAGTAAGACACTGTTCAGCATTGTTGTGTA ACTATTCTATTCTGCAACTGGTTCTTAAATATGTATTTCATATTTGATACCGAGAAAATGTTAGGATTTGCCAGTTGGTTGTTCACAAGATGACTCCCTA AATAAAGCCTCTGTTTTGATCACATTCCTTGCTAATGCTTCCATCATTCATGAAATATATATAGTCATATCATCTCCTTATCTTGCATTGTATAGAGAAG GAAAAATCAATGTTGTCGAGTGTATTAAGCTATCCTTTATGCTCATCTTTTAAATGCCCTCCAACGTCTGAATATGTTGGTTCAGGTGCTGGTGTTTATT TCACCTAGTTCTAAACAGATTCCCAATTAGCACATGATGTGAGTTCTCTAACCTCAAAGAAAAATGGTTTTTCTTGTGTCTCGATGTTATCCTTCCTTTG CTAATAAGTAATAGCTAAACTTTCAATTAGGTCTGAATTCTGGAAGCATGCATACTTTTGAATGGGTGCACTTTTTGATGTTTGATGTGGCATTGTATAT GATGCTGCACTTATTAAGTTAGTCAAATATCTTATCCTTACCAATTACCAATATAATGTGAAGAGAATGGAAATATGTTTCAGATTGATGTATCTCGGTT CTAGTCGAGGGATTACATTTGCATCCATCAGTGATAATCATACCTGTCATAGCAAGTTTGTCACTTTGCGCACCCAGTTATTTGCCATACATAGCGTTAC GGGAGACGTTGGGAGTAATTGTTTGTCACTTTTGGTTTGTTTTGTTGTTCAATATCAAAAGAGATTCTTTTTTCTTCTATTGTCCATTCTATATCTTATT TCTGATTATTTCAAAGTGTCGTGCCATCCATAGGCAAATGAAGAATCGAAAGATACAACATGTGAGGTTGACTTCGTATGGCCAGGGGTTTTTGTTTCTG GGCATGTCTGTTGTATTTGTGTATTTTTTTATCCATTATTTATTAACTTTTGGTTTTATTGGGTAGAGGAAGGATTTCATACTGTTTTTTCTGATTCAGG AAGAAAGGAACAAGAGCCGAAGGACTGATCGGCATGATGACAGGAGATCAAAAGAACGGAGTAGGGA BLAST |
| Tissue | pods |
| Gene name | LI_gene_165073; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_436623
| Blastp | Putative RNA-binding protein Luc7-like 1 from Mus with 37.84% of identity |
|---|---|
| Blastx | Luc7-like protein from Dictyostelium with 42.2% of identity |
| Eggnog | S. cerevisiae(COG5200) |
| Kegg | Link to kegg annotations (66978) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449849.1) |
| Pfam | LUC7 N_terminus (PF03194.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |