Ll_transcript_437482

• Id Trinity: TRINITY_DN48935_c3_g3_i2
• Name Transcript: Ll_transcript_437482
• Sequence: ACCACCACCACCGCCACCGCCACCAACCACCCTCTCCCTCCCGGTTTCACACCCTCCCAACTCCTACACCTCCTCCGCCGCCAAAACGACGACACCTCCG CCTTCCGCATCTTCCAATGGGCCTCCTCACAACCCAATTTCTCTCCCAATTCCTCTGTTTATCACGAAATCCTTCGCCTGCTCGCAAAATCCGGTAACTT CGATTCCATGAACACCGTTCTTCAACAAATGAAACCCTCTTCCTCCTGCCACGTCATCGATTCCGGTACCTTCTTAATCTTCGTTGAGGGTTACGCTAAC TTTCACTTATATGAAGAAATCGTTAAAGTCCTTCACATTATGGAACACGAGTTTGGGTTGAAACCCGATACACATTTCTATAACATTGTGCTGAATGCTT TGGTTGAAGGTAATAAGCTTAAGCTTGTTGAAATTGTGCATAGTGATATGGTTAGTGCTGGTGTTAAACCTGATGTTTCGACTTTTAATGTTTTGATTAA GGCGCTTTGTAATGCACATCAATTGCGCCCCGCGATTTTGATGCTGGAGGATATGCATAATTACGGGTTGTCGCCCGATGAGAAAACGTTTACCACACTT ATGCAAGGTTTTATTGAGGAAGGTGACTTGGATGGCGCGTTGAGGATCAAAGAAATGATGGTGGAGTCCGGGTGTTTGTTGACGAATGTGTCTGTGAATG TTTTGGTTAATGGTTTTTGTAAAGCGGGTAGGGTTGAGGAAGCTTTGAGCTTCATTGAGGGGGTTGCAGAGGAGGGGTTTTCGCCAAATCAGGTTACATT TAATTCTTTGGTGAATGGTTTGTGTAGGACTGGGCATACTAGGCATGCTTTGGAGATAATGGATGTGATGAATGAAAGGGGGTTCGATCCGGATGTGTAT ACTTATAATTCTTTGATATCTGGATTGTGTAAGTTGGGTGACATCGATGAGGCGATTGAGATTTTGCAACAGATGGTTTTGAGAGATTGTTCACCGAACA CTGTGACTTATAACACGTTGATTAGTACTCTGTGCAAGGAGAACCAGATTGGTGCAGCCACTGAACTTGTCAATTTTCTTTCCAGCAAGGGGATATTTCC TGATGTTTGTACATTCAATACTTTGATACAAGGGCTCTGCTTGTCTAGAAACCGAGAAACCGCGATGGATGTGTTTGAGGAGATGAAGGAGAAAGGGTGT CATCCTGATGAATTTACGTATGGTATATTGATTGACAGCTTGTGTTCTGAAGGGAAACTTAAAGAAGCCATGATGCTACTGAAACAAATGGAGAAAAGTG GATGTGCTAGGAATGTGGTGGTGTACAATACTTTAATTGATGGTTTATGCAAGCACAAAAGGATTCGGGAAGCTGAGGAGATATTTGACCAGATGGAACT CCTTGGGGTGTCAAGAAATTCTAGAACGTATAACACCCTTATTGATGGCCTGTGTAAAAGTAGGAGAGTGGAAGAAGCTGCTCAGCTTATGGATCAGATG GTAATGGAAGGACTAAAGCCTGATAAGTTCACTTATAATTCGTTGCTTACTTTCTTCTGCCGCAATGGCGATATAAAGAAGGCAGCTGATATTGTGCAAA CTATGACTTCAAATGGGTGTGAACCTGACATTGTCACCTATGGGACCCTTATTGGGGGACTATGTAAGGCAGGTAGAGTAGAGGTTGCAAGTAGGCTCCT CAGAACTATTCAGATGAAAGGTATGGTGTTGACTACTCGTGCTTATAACCCTGTGATTCAAGGACTCTTTAGAAGAGGAAAAACACAAGAAGCAATTAGG CTTTTCAGGGAAATGATGGAGAAGGGTGATCCTCCGGATGCTGTAACGTACAAGATTGTTTACCGTGGCCTCTGTAACAGTGGAGGGCCAATTCAAGACG CTGTTGATTTTACAGTTGAGATGTTGGAGAAAGAAATATTGCCAGAGTTCTCAACCTTTGGTCTCTTGGCAGAAGGTCTTTGTTCTTTGTCTATGGACGC GACCCTCGTCGAACTCATCAATATGGTGATGGTGAAAGCCAAATTCTCCGAGGCTGAAACATCTATAATCAGAGGCTTCCTCAAGATCCAGAAATTTAGA GATGCATTGGCCAATCTCGGTGGTATCTTGGATAGAAAGTCCAGAAGATTTTGAGTAGTGTAAAGTTTTCCTATAACTGCACTCTGGTGATACTTTAAAC AGTATTAGTGGGAAAAGGTCCTCGTTGCATGAAGGTGTTGAAGAGTATGTGGAAGCTCAAAATTCGGGACACGAGTCTATTTTACAGACTTGGAGTCAAC ATATTTCAGCACTAGGGGCTTCCTCCTGGCTTGCCTCATTGCCGAGTACCTAATCTCCACCTTTGTTATTTCCAGTTTCTAGGAAAAAATGTGAACCATG TAACTTGTAGCTGACAATCATATGAATGTTGCTTAATTAATTTAAAGCATAAGAAATGGGTCTTTCTCTTAAATTTTAAGTTTGTTATGCCAGGATGAGT AGCAGTTGTGTTTGACTTGGAAATACTGGTTAAGAATCTAGAGTCTTAAATTATTTTTATGAGTGGCAGTTTTGTATTTGACTTATTACTTTTGCTTATT TTCCCTTTCCCTTCATTAATTTGAGATTATAGAGTAACATCGTGACTCATGAGCTGCCAGAGG
• Tissue: pods
• Gene name: LI_gene_165204;
• Additional information: details;

Expression of Ll_transcript_437482

FPKM

• PAB: 1.2
• PNAB: 6.3
• PS1: 5.4
• PS2: 3.5
• PS3: 5.6
• PW1: 2.5
• PW2: 2.7
• PW3: 3.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_437482

• Blastp: Pentatricopeptide repeat-containing protein At3g53700, chloroplastic from Arabidopsis with 69.26% of identity
• Blastx: Pentatricopeptide repeat-containing protein At3g53700, chloroplastic from Arabidopsis with 70.41% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT3G53700)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019428536.1)
• Pfam: Pentatricopeptide repeat domain (PF13812.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;