Ll_transcript_438035

• Id Trinity: TRINITY_DN48944_c1_g2_i2
• Name Transcript: Ll_transcript_438035
• Sequence: TTGGCAAAAGTTTTGTACTTTTTGGTTTGTTACATGTATCTTGATAAGAGAATCTTGTCCGAGCCGAAAATATATGTAGGCATAAATCAAAAATGGGTCT TGTGTTTTTTAGTGGGTATGATATGGAAGACAATGATGATGAAGAGGACCTTATCATCTCTCTCTTTCTCAATGAAGAAAGGAACATTTAAAAGGTTTTT AAACTTCATAGTGAAAGAGAAGAAGGTTATGAAGCCTATTGCAGTGAAATGTGGTTTGGCTTTGGCTCTTACCTTTGCTGGATTTCTCTATTCTCGCAGA AGACTCAGAAGGATCAAACCTTCCCATAAGGGGCACCCTTCAGGTCATGGAAATGAAGTTAATTTAGGAAGAAGTATAAGGATATCTAGATCTTACAGCT CTATTTCAGAGGGAAATATTCAGGATATTGAAAAAATATGCATCAACAAGGTGATTAGTACTAATTCCCCAATTGGTACTAAACAAAGTGGAGAGAAATG TGAATTTAATAATCTAGTGAAGGATGCAGAGTTTGGAGTCACGGTTACTCGAAATTCGTATAAGAAAGATGTAGAGTCACCAAGGTCAAAAGTAGATTCT CCTCAAGGACATGGTAGTTTTGATAAGGATGATTATGAGCAAGAGGTAAGGCAACTTAGGAGCATGATCAGAATGCTTCAAGAGAGGGAACGGAATCTCG AGATTGAACTGCTTGAGTACTGTGGCCTTAGAGAGCAAGAAGCAGCTGTGATGGAGCTTCAGAATAGATTGAAGATAAGTAATATGGAGACAAAGATGTT TAGTCTGAAGGTTGAGACCTTGCAATCTGATAACAGGAGATTGGAAGCGAAGGTGGTTGATCACGCGAAAGTGTTGGCCGAGCTTGAGAATGCGAAAACA AAAGTTAAACTTTTGAAGAAGAAAATTAAGTATGAAGCTGAACAGAATAGAGAGGAGATCATGAACCTTAAACAAAAAGTTACCAAGTTACAAGACCAAG AATTGAAAGGTGCAGCCAGTTATTTAGATGTTCAAATAAAGCTGAAAAGGCTTAAGGATCTAGAGTCTGAGCTAGAAGAGTTGAAGAAATCTAATTTGAG ACTACATATCGAAAATGCTGACTTAGCTCGAAGATTGGATTCTACTCAGATCCTTGCAAATGCTGTTCTAGAAGACCCGGAGGCCGATGCTGTGAAGGAA GAAGGCGAGCGCCTTAGACAAGAGAATGAGGGGTTGGTGAAGGAAATTGAGCAACTACAAGAGGATAGATGTAAAGATCTTGAAGAACTAGTGTATTTGA GGTGGATAAATGCTTGCTTAAGACATGAACTAAGAAATTATCATCCACCACCTGGTAAAACAGTTGCAAGGGACTTAAGTAAAAGCTTAAGTCCTACATC TGAGAAGAAAGCCAAGCAGCTCATACTTGAATATGCAAACACCGAAGCACAAGGTAGCCTTTCCGACTTTGATTCTGACCAATGGTCCTCCCCTCAGACT TCTTTTCGTACCGAACCTGGAGAGTGCGATGATTATTCTCCTCTTGATAACCCATCTGATGCCAGATATAACACCGTGACGACAAGCAAGTCAAAGATTT TTAGCAGGTTTATTAAGCTGATGCGCGGCAAAGATAGCCAACATCGCGATAGTAAAGTTACATCACTAGAAAAATCTGCATCTAGAGATGATATTAACTC TTCACATTTAAGAACAAGTAGATCAATTGGGAATGGTATTGATGCTGAAGGTCATAGGAGTGAGCTTGCAACTCCCACTGACACATCTATGAATACTCTT GATCTCAAGAGGACCTTGAGTTTGAAGGATGAAGATATGACAAATGCTGATAGCTTGGCTGCAGGAAACTTAAAGAAGTGTGGTCTAGTGAGGAGAGGTT CCGCAGATTTTAGAAACCGCGTCGGCTCTTTCTCAGAATCTCCATGCACAGACAAATCTAATTTGATGAAATATGCTGAAGCTTTGAAAAATTCTAGTGG AAGATCCACACTTATCCCACATAGAAGATCAGCATCATATAGCCCATTTTAACTTATTAGTAATTAGCAACATACAAAGATTTTGCCTTTTCCTAATGTG AATATTTCAGATTAAAAGGTTATAGTTATATAGTACTGAGTCCTGATATACAATACTAATCATTAATATCTGTTCAGATCACATGCTGAACATGTAACTA TGAAGCCCAAATACTCCAAAAATGGATAAGTATTGGTGTTGTATTTTAACTCATAGTATCATAGCATTTTAACTTCTAGTTATACCTATTGCTGTT
• Tissue: pods
• Gene name: LI_gene_165259;
• Additional information: details;

Expression of Ll_transcript_438035

FPKM

• PAB: 0
• PNAB: 0.4
• PS1: 0.6
• PS2: 0
• PS3: 0.1
• PW1: 0.2
• PW2: 0.1
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_438035

• Blastp: Protein CHUP1, chloroplastic from Arabidopsis with 35.25% of identity
• Blastx: Protein CHUP1, chloroplastic from Arabidopsis with 42.39% of identity
• Eggnog: Chloroplast unusual positioning(ENOG4111F63)
• Kegg: Link to kegg annotations (AT3G25690)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019424857.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;