Id Trinity | TRINITY_DN48947_c0_g1_i1 |
---|---|
Name Transcript | Ll_transcript_438061 |
Sequence | AGGCGCTACACCAAACACCCAAGCATCTTTACCAATAGTCCTTTTTCTCTCAGCACCACTTCATTTCAATACATTACAAAACTGGACCCCTTTCAACCCG AACCCATCATGGTCGGGCCCTCACAACCCGCTCCAAAATCTACTATCAAATTCCTCTGCAGCTACGCCGGAAAGATCCTCCCCCGTCACCCTGACGGTAA GCTCCGCTATGTCGGCGGCCACATCCGCGTCCTCGCCGTTGATCGCACCATTCCATTTTCCGAGTTGTTGTTGAAACTAGAAGAACTGTGTGGAACTTCC GTGAGGCACCTTCGCTGTCAGTTACCAGCTGAAGATCTCGACGCTTTGGTATCCATAAGCTCCGATGAGGATCTCGCAAATCTCATCGAGGAATACGATC ACGCGCCGTCGCCGTCGTTGAAGGTCAGAGTATTCCTCTCACTGCCGAGATCTCTGAAAAAGGTTTCCATGCCTTCGTCACCGTCTCTGTCAAAATCAAC GTCCTCCTCATCCTCTAACTCCTCGTCAACTTCGTCGTCATCATCACATCACAGCGCTACCGGTGGCGGTTCTGGTTTGAATTCTGGCCGTAGTTTGAAG TCAGTAGTGCCGGTGATAAACCGCTGTGTCCATCAGAAATTGCCGACGGCAGCATATCCAATTTGCATGGAGAAAAAATGTGGTGGAATTGAGAAGAATA TTCCTCATCCCCGTTACGGTTACCATACCCTGGGTCAAGGAAAGACTTGCCACACTGGCCATATTTATCTGATTCACAACAGCAACCACTGGCAATAGTA GTGGCAATATTAATATGATTTTGTTTATGGATGAAGGAAATCATGGAATGGAACTACTAAGATTAAGAATCAGTTATTATCATTTAAGAGAAAATGGCAA AATGAGTTTCAATAAATCATCAATATATGTGATATATGATAATTAAAATGGGAAGAATGAAAATGAAAAGGATCCAGTATATGTGTGACATGAAGGGAAT GGGACTGTAAAATTGTTGAGAAGGATTGCGGTTTTAGCTTGTGATCCTTGTTTGCCCATTAATGAATTTCCCTCTAATTTCATCTTTGGCTCGATTTTTG TGATGGTGAGTTCGTTCGTCAATTTTCTATACTATGTGTATGTGTCTGTTTGTTTTTCCTGTGCGTGTGTTGAGAATTTTATAGCCATGTTGCTCTGCTT CCACAACCTCATTAAGTTGCCATGCTAGCTTTTCTTTTCTTTTTTTCCTTTTTTTCAGGCCATGGGCCTTATTCTCTTCCATTGTCATCACTGTACTTAC ATTTTTTTTTTTCCTGTTTTGTAAAGTTTTTATTTTATTTTAATTTTAAGTTTGTACATTATTAATTAATTGATTGATAGTCTAACATTTTTGTTTGCAG GGTGGTTTAAGCAGAAGGGTAAAGAATCTTACCCTACCAGATGCGATATAGCGTTTGACATGCTTATATTGTAAGTTTTTCCATATCTGACATTAATCCT GCTTTTCCCTCAAACTTATACGCTTATGCTTTATCCCTCTATATGTTGTTACTTATTATGCTATCGCAATTCTCTTTTGGTGTTTCATTACTTGTGAATT TAACCAATAATGACGTTCAGGTTCAGTTCTGGATTTGAGCCAGATTCAAATGAAGTGCTACTACGATATATGAACACGAAACTGAGATTCCAATGCCATG TTGGAATTGGAGGCGCATGGTATATTGGGGGACCAGATGACTCATGCGAGAGATAAAATGGACTGATCCAAATGAAAATTATATTTATCTGAGGGGATAG ATGGCTCACCAAAGCACCAGAATAACTTGAACTTTAAGCGATATCCTAATATTCTTCTTTATGGTACATATTAAGACAAAAGGAACACAAAAGAAAATGG AAGAAAAAAACCACTGAAAGTAGGGTCGTCACTTCCCCGAAGAAAGCGTCAAAGAGTAGGATTTGGTCTTGGAGAAAGGACCTCCGCTCATGTTACATTC AAAGGGAAGAACCAGAAGATTCCCTTTGCTGTTTGAGATTTGGAAGAGATAGGACTATCTAGTTACACGGAATTGATTAACTAATAATTTATTCATTTAG GTTATGGAATCATGAGAAAGTACAAGTTTAAATTCAAAGTTTATTCCTCAATTTTTTTGACGTGTTGTATATCATTTTTTAAACACAAATACTGCTTTTG AAATACTAGTTAACGTTTTATTCGTAAGATAACTCAACTAGTCCTTTTATCGACAATAAATAAGATAAGTTGGGTTCATTGTTGAACCATCACACTTCAC ACAAAGAACCAAGATCTGATGTACAATTTTTTTTTCCTATCGTGTACTAAGTCAATCAAATCTTAT BLAST |
Tissue | pods |
Gene name | LI_gene_165295; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_438061
Blastp | - |
---|---|
Blastx | - |
Eggnog | - |
Kegg | - |
CantataDB | Link to cantataDB annotations (CNT0002595) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019422585.1) |
Pfam | PB1 domain (PF00564.23) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |