| Id Trinity | TRINITY_DN48948_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_435838 |
| Sequence | CGAGCATCATTAACCAACCATTCTCTTTCTTTGTTTCTCTATCTTCTCTCTTCACTTTGTTGGTCAACCTTTCCTCATTTGCTCTCTCTCTCAGTCCTCT ATTATCTCCTTTATTGGAAAGTACTCAACATCACAACAACAACACTCTTGATGCAGAAACCCATAAACTAAACTATCAACCTTCTATGTCATACTTGAAA CTTTCTTTTCCTTCTTATGCCTATTCCATAATAGCTGAGTGCAAAGTTGCAAACTTTTTTGTTATGGGTCATCAGATGGATTAGCATAATGTGAATAATC TCAATTTTTGATTCCGGGTATCTGACTTTTTTTGTTGCTTGAATTGCAAGTGATTATAGTGTTGGGATTGTGGAAACAATGTCTTTCTGTGATTTTGCTA ACTTGAGTTGACGCATCCTTAATTTAGCTATAGAATATGCTGTTTTTACTTAATTGATATAGGAGGCTAAATTTTTTGTTTTGGTTCTAAATAAAGTCAC TATGGCTCAATTGGAACATGGTATATTTGGGGTCATGGATAGTGCAAATGAAGCATCATCATCCTTGAGCTTTGTGTCATCTCTCTTATCAAATGGTTCT AGCAATGAGAATGAGGCAAATACTGAAGTCTTGAGTCTAAGTAGACTCAGTGGAAGCCTTGAGAAGTTATTGATTGATGGTGAATATGATTATAGTGATG CTGAGATTCTTGTTGAAGGCACCCCCGTGGGTGTTCATAGGGCTATATTGGCTTCGCGTAGTTCATTTTTTCATGAGCTTTTTAAGAAAGGAAATGTGGA TTCAGTTAAGGAAGGAAAGCCAAGGTATCTAATGTCAGAATTGGTGCCTTATGGGAGGGTTGGTTATGAAGCATTCCAAGTTTTCTTGCATTATTCGTAT ACCGGAAAACTAAAGGGTTCACCACTAGAAGTGAAAACATGTGTTGATGAATCATGTATTCATGATGCTTGCAGCCCTGCTATCAATTATGCTTTGGAAT TGATGTATGCTTCTGCCACTTTTCAGATGAAAGAGCTTGTTTTACCTTTTCAGAAGCATCTCCTAAATTTTGTCGAGAAGGCTCTAGTGGAAGATGTCGT TCCTATTCTTATGGCCGCATTCCACTGTCAATTAAGCCAGCTTTTCTTCCATTGCATTCAGAGAGTAGCAAGGTCTGGCCTTGACAGCATATATTTGGAG AAAGAACTCCCTCATGAAGTCGTGACTGAAATCAAATCGCTCCAAGTTCAACCTCATCCAGAATCCACACCTAATAATGCAATGGAAGTAAAACCTTTGA ATAGCAAGAGTATCAGGAAAATCCATAAAGCATTGGACATTGATGATGTTGAGCTATTGAAGCTTCTTTTGAATGAATCAAGTGTCACACTCGATGATGC TTGCGCCTTGCACTACGCCTGTGCGTATAGTCAGGCTAAGGTTGTCCAAGAGGTTCTTACTTTAGGCCTGGCTGATATTAACCATAGAAATGTGAGAGGC TATTCAGTTCTTCATGTGGCTGCAAGAAGAAAAGATCCATCCATTTTGGTAGCACTACTGAAAAAGGGGGCATGTGCATCATATACAACTCCTGATGGAC AAACTGCACTTTCAATATGTCAAAGGTTGACTAGGCGCAAGGATTACCATGAGAAAACATTGCAGGGAAAGGAATCTAACAAAGACAGGCTCTGTGTTGA TGTCCTTGAAAGAGAGATGAGAAGAAATTCTATGTCTGTTAACATGTCTGTTTCATCAGAGTTAACTGCTGATGATTTGCACATGAGACTTGATTACCTT GAAAATAGAGTTGCATTTGCTAGGCTGTTGTTTCCTGCTGAGGCTAGGGTAGCCATGGAGAATGCTGAGGCAGAATTAACATCACTGTATTCAAGCTCCA CAGATATGAAGGGATCAAGTGACAATCTAAAAGAAGTAGATCTAAATGAAACTCCCTCTGTTCGGACCGAAAAACTTGTGTATTCCCTTCTTAAGACAGT TGAGAATGGTAGGCGCTTCTTCCCCCATTGCTCTGAGGTGCTTGATAAGTTTTTAGGAGATGATATGGCTGATGTTTTCTTCCTAGAGAAAGGCACAGAA AAAGAGCAGAAAATGAAGAAAGCACGCTTCATGGAACTTAAAGACGATGTGCAGAAGGCATTTCACAAGGACGTGGCTGAAAGTAACCACCATTCCGCTG GTTTTTCGTCCTTGTTGTCGTCCTCATCTTCCTCTTCTCGTAGAGAAAGTCTAGGCCATAGAGTGAGGAAAAGGTGAAGTCCATGGCTTGTTGCTTAAGA TGTTGGCTTTTTGAACTGGTTTTACAAGAATAGCAAATATATTATATTTTGCCAATAAGGGAAGGGGATCAATAACATGGGAGAATTTTACTAGCTTGAT GTTCTTGCTTGGATCAAAAGAAAGGAAGGTAGAAAACTAGAAATATATGTTCCTTCAAAGTAGGAGTATCACTCATGTAATATTAATATATGTGTCAAAT GAACCATTCCCTCAAGACACAAGTTTCCATGGTTTGATTCCTATTATCCCATGCTAAGATTGATTGTGCAAATTTTCTGGCTAAAGTATTCATGAAATAA ACACAAGATTTGTTTCATATGAAAGGAGTCACCACTCACCAGTGTGCATTCTCTACAGAAAAGAAGATCATTTACACCAAGTATCACATGCAAGTTACAT TAACCTATTCAGATGGCACTTCATTCAGGGGATGTTTCTCAAATGAGTTCTAATATATGAACACTCATAATATGAACATTTGTGAATGAATGTTTTAAAA AATGTTATCAGATTAGACCTTTCTTGCTCAAGCACATTGAGCAAATGAACCAAGTGTGCTACCACAAAGGTGAAGCCACAGGTCCATTTTCCTCAGCTAG AAATCTAGATTTACTTGCCTATGGAATAAAAAGAAATTAAAGTTTTCTTCTAAGTTTAAAGAATATGTGATTTATTACTACTGTTGCATACTTGCATG BLAST |
| Tissue | pods |
| Gene name | LI_gene_165302; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_435838
| Blastp | Regulatory protein NPR3 from Arabidopsis with 53.52% of identity |
|---|---|
| Blastx | BTB/POZ domain and ankyrin repeat-containing protein NPR2 from Oryza sativa with 52.39% of identity |
| Eggnog | Ankyrin Repeat(COG0666) |
| Kegg | Link to kegg annotations (AT5G45110) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019435348.1) |
| Pfam | BTB/POZ domain (PF00651.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |