Ll_transcript_435855

• Id Trinity: TRINITY_DN48948_c2_g1_i4
• Name Transcript: Ll_transcript_435855
• Sequence: ATGAAAGAAAAGAAACATTGAATGAAAGCACAAAGTTCCAAACTTTTGTGACTGTCGTGTTCAACCCATAACCAGACAATGGAGATAAAAGGAGGGCCTT ATATCTTATATCCAATTATGAAACACAATATTATTCTCTTTTTCTCACACAAAAGACTCAATTTTTCTCCATAAAATATATAAATAGAAGGAGACAATGA AAACAATTAGTAGAAGGTGAGTGTAGAAGAGTGGAGTATTTGGTGGGTCATATTTGTGAAGAAGAGAAAGATAAATACTCCACTTCTTAGTGCCCATTCT TAGTTTTTGCTCCATCACGTTGATGTTGATGCATTCAGCTATATGTTCATTTAATGTCAAAACATTCTTGTAATTGGGTCAAAGCAGCAACAACATCTAC ATAGGTTTGCATCTTGTTTCTTCTTTACATGTTAGTGGTTGGATTTTCGTGTAGTTTAGGTAAGTGCACATAGTTATATAGATAAGTGTCAAGTTTGTAA CTAACTTCATAATATTTTACTAGTATTTGCTAATTGGTTCCTGAAATTAATGGGGGAAAGTCATAGCATATGCAATCAGTTGATGCATACTTTCTTTGTG AATGCTTCAATTATTTTGTTTATTTTTTATGTTTGGATTTAGTTTCCCATTGTGTGTTTTTGTTACAACCAATGAAATATTGTTTTTTTTTCATTTTAGG TTGATGTTACTGTAATACACTAAGATTGAATATGTTGTGTTTGTTTTGGTTCAATTACAGATAGTTTTATAGGACAATTTTGCCACTTGCTGGAACTGTG GTTTTCAAGAATTTAATTGGACAAAAGTTTGTGGCTTTGCTTTTTAGCCTGTGTTTTCAACTCGGGTTTTTATTGAAGGGAGTTTAATAGTTCAGTGAAG GATTAGTATTTGAGAAATTGGAAGTCAATAAGGAAAAGAATCAGCTTAGCAAGAAGGTAGCTAGAAGGGAAGGATTAGTTTAATCATGTCTTTGACATTA TTGTGGATTGTCTCCTCCCCTGGCTTAGAGGTCTCCAATTCCGCCGGGTTGTTTGATTCTATCCGAAATGCGAAACTTTTAGGTTCTTCCAAGTCTATCT CTCATGATTTGGGGTCAATTAGAGCGAAGCAGGACAAGAAAAAGAGATGGCGATTTTGCTCTTTGAGTGCGGATACAAATTATGCTTGTGTTGGTCAATC TGGATTACACGGTTCTATCAACTTCCCTCTTCTGTCAAATGTGCTTGCAAACCCAGCCGCAGGAGAAGCCGCTGTTTCATCGGAGCAGAAGGTTTACGAT GTGGTGTTGAAGCAGGCATCTTTGGTTAAGAGGAAGCTCGGCTCTACTGGTGAAATTGAAGTGAAACCGGAAATTGCTCTTCCTGGGAATTTGAGCTTGT TGAGTGAAGCTTATGACCGATGTGGAGAAGTTTGTGCAGAATATGCTAAAACATTTTACCTTGGAACTCTCTTAATGACCCCGGAAAGGAAAAGAGCTAT CTGGGCAATATATGTGTGGTGTCGGAGAACAGATGAGCTTGTTGATGGCCCTAATGCTTCACATATTACACCAACTGCTTTGGATAGGTGGGAATCAAGA TTGGATGAACTTTTCCAGGGTCGTCCATTTGATATGCTTGATGCTGCTGTATCAGATACAGTCTGCAAGTTTCCTGTTGATATCCAGCCATTTAAAGATA TGATAGATGGAATGAGAATGGATCTTAAGAAGTCGAGATATAAAAACTTTGACGAACTATATCTCTATTGTTACTATGTTGCTGGGACAGTTGGTTTGAT GAGTGTTCCAATCATGGGCATTTCACAGTATTCACAAGCAACCACAGAGAGTGTGTACAATGCTGCCTTGTTCCTAGGAATTGCAAATCAGCTAACCAAC ATACTCAGAGATGTTGGAGAGGATGCTAACAGAGGAAGAGTGTATCTACCACAAGATGAGTTGTCTCTAGCAGGGCTTTCAGACGACGACATATTTGCTG GTAAGGTGACAGACAAATGGAGGTACTTCATGAAGGGCCAAATTAAAAGGGCAAGAATGTTTTTTGATGAGGCAGAAAAAGGAGTGACAGAGCTTAACGA AGCTAGCAGATGGCCGGTATGGGCGTCGTTGCTGCTATATCGGCAGATATTGGACGAGATCGAAGCTAATGATTACAACAATTTCACTAAGAGGGCTTAT GTAGGCAAAGCCAAGAAGTTACTTTCTTTACCAATTGCCTATGCAAGATCTCTGGTTCCTCCATCAAGAAAAGTATCTGCTGCAATAAAGGCATAGATCT CATACCATATAAACTTCTGTAGAACAATGTGCAATGGAAAAAGAGAGTAGAAATGCATAATCTGTATATTATAAAGTATTAAGGCATTCATTATCCACTT ATTGTAGTTGATATTACTTTTTGCCATTTGCTTTGTTCTTTAATCTACACGGTTTTTTGTTTCAAGAAATGTTTTCTATTTCCTATTTTCGTTTTCAAAA AATAATTTCCATTTTGATGTTTTCATTTCCTCA
• Tissue: pods
• Gene name: LI_gene_165307;
• Additional information: details;

Expression of Ll_transcript_435855

FPKM

• PAB: 75.5
• PNAB: 10
• PS1: 5.3
• PS2: 3.7
• PS3: 6.5
• PW1: 11.1
• PW2: 14.6
• PW3: 19.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_435855

• Blastp: Phytoene synthase, chloroplastic from Cucumis with 73.97% of identity
• Blastx: Phytoene synthase, chloroplastic from Cucumis with 73.97% of identity
• Eggnog: -
• Kegg: -
• CantataDB: Link to cantataDB annotations (CNT0001867)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019432581.1)
• Pfam: Squalene/phytoene synthase (PF00494.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;