Ll_transcript_435852

• Id Trinity: TRINITY_DN48948_c2_g2_i1
• Name Transcript: Ll_transcript_435852
• Sequence: TGTAGCTAAGGTGAGAATATTCCAATCACATTTTTCTTAAAAACCAATCCCAACTCACTTCTATAATCTCAAACTTACACACCCTCTCTCTCTCTTTGTG GTGTGTTGTTTATTTCACTTCTATAGCTATTCCAAACTGCACCAAGTACATTGGAAATTGTACTACTCTTGAGTCTTGAGATGTCAAGTCTTCTTCTGAG GGTGAGTTTTGGACCAATAGAAGACACCAACTCCTTGTTGGGTTTTGCATGCAGAAGTCATATTATTGAAAGAACCCAAAGAAGGTTGAAAGGAGTCACT TTTGCAAATAAGGCTGTTGCTTTATCAAGTGCTGTAGTAGCAAACCCAGTAATATCTTCAGAGGAGAAGGTCTATGAAGTGGTGCTTAAGCAAGCAGCTT TGGTTAAAGAAAGGAATAGGGATGCAAAGATAGCCTTGGATTTGGATAGTAAGCCACTGGAAAATGCTGAATTCAGCAATGGGAATTTGTTGAATTTGGC TTATGATCGATGTGGTGAAGTTTGTGCTGAGTATGCTAAGACATTTTATCTTGGCACACGATTGATGACCGAAGAGCGCCGAAGAGCCATCTGGGCAATC TATGTGTGGTGCAGAAGAACTGATGAGCTAGTTGATGGTCCAAATGCTTCATACATCACTCCTTCGGCATTGGACAGGTGGGAGCAACGACTAAACGATG TCTTTCAAGGTCGTCCTTTCGATATGTACGATGCTGCCCTCTCGGACACTGTCACTAGGTACCCTGTAGATATACAGCCTTTCAAGGACATGATAGAAGG GATGAGGATGGACCTGAGAAAGTCGAGATACAATAATTTCGATGAGCTCTACCTTTACTGCTACTATGTTGCTGGGACAGTGGCTCTTATGAGTGTTCCT GTAATGGGCATAGCTCCTGAATCTAAGGTTTCAACTGAGAGCATTTATAATGCTGCATTGGCACTAGGCATTGCAAATCAACTTACCAACATACTCAGAG ATGTTGGAGAAGATGCTAGGAGAGGCAGAGTATATCTCCCACAGGATGAATTGGCAAAGGCTGGCTTATCCGATGAGGACATTTTCTCTGGGCAGGTAAC CGACAAATGGCGGAGTTTCATGAAGGGCCAAATAAAGAGGGCAAGGAAGTTTTTCGATGAAGCAGAGGAGGGAGTTACACAGCTTGATGCAGCTAGCAGA TGGCCTGTGTGGTCATCATTGTTGTTGTATAGACAGATCTTAGATGCTATTGAAGCCAATGATTATAATAACTTCACAAAAAGGGCTTATGTTGGAAAAA CAAAGAAGCTATTATCACTACCTGCTGCTTATGGTATAGCTCTCATAGGCCCTCAGAAGTTAAGCAAGATGGTTTTGGGATGAATGATGAATATTATAAT GTGCCCATTGCCCACGATCAATTTGAAAAATTCTGTTGCATAGAGTATAGGTTGCTACAACTACATACCTCTCTTGGATTAGAATTGTTTACTTATTTAA TTACTGGACAACATGCAAGTATGCAACAGTAGTAATAAATCACATATTCTTTAAACTTAGAAGAAAACTTTAATTTCTTTTTATTCCATAGGCAAGTAAA TCTAGATTTCTAGCTGAGGAAAATGGACCTGTGGCTTCACCTTTGTGGTAGCACACTTGGTTCATTTGCTCAATGTGCTTGAGCAAGAAAGGTCTAATCT GATAACATTTTTTAAAACATTCATTCACAAATGTTCATATTATGAGTGTTCATATATTAGAACTCATTTGAGAAACATCCCCTGAATGAAGTGCCATCTG AATAGGTTAATGTAACTTGCATGTGATACTTGGTGTAAATGATCTTCTTTTCTGTAGAGAATGCACACTGGTGAGTGGTGACTCCTTTCATATGAAACAA ATCTTGTGTTTATTTCATGAATACTTTAGCCAGAAAATTTGCACAATCAATCTTAGCATGGGATAATAGGAATCAAACCATGGAAACTTGTGTCTTGAGG GAATGGTTCATTTGACACATATATTAATATTACATGAGTGATACTCCTACTTTGAAGGAACATATATTTCTAGTTTTCTACCTTCCTTTCTTTTGATCCA AGCAAGAACATCAAGCTAGTAAAATTCTCCCATGTTATTG
• Tissue: pods
• Gene name: LI_gene_165308;
• Additional information: details;

Expression of Ll_transcript_435852

FPKM

• PAB: 56.3
• PNAB: 12.9
• PS1: 33.9
• PS2: 55.2
• PS3: 92.4
• PW1: 4.7
• PW2: 5.6
• PW3: 2.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_435852

• Blastp: Phytoene synthase, chloroplastic from Daucus sect. Daucus with 73.39% of identity
• Blastx: Phytoene synthase, chloroplastic from Daucus sect. Daucus with 73.39% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019435350.1)
• Pfam: Squalene/phytoene synthase (PF00494.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;