Id Trinity | TRINITY_DN48948_c2_g2_i3 |
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Name Transcript | Ll_transcript_435870 |
Sequence | TGTAGCTAAGGTGAGAATATTCCAATCACATTTTTCTTAAAAACCAATCCCAACTCACTTCTATAATCTCAAACTTACACACCCTCTCTCTCTCTTTGTG GTGTGTTGTTTATTTCACTTCTATAGCTATTCCAAACTGCACCAAGTACATTGGAAATTGTACTACTCTTGAGTCTTGAGATGTCAAGTCTTCTTCTGAG GGTGAGTTTTGGACCAATAGAAGACACCAACTCCTTGTTGGGTTTTGCATGCAGAAGTCATATTATTGAAAGAACCCAAAGAAGGTTGAAAGGAGTCACT TTTGCAAATAAGGCTGTTGCTTTATCAAGTGCTGTAGTAGCAAACCCAGTAATATCTTCAGAGGAGAAGGTCTATGAAGTGGTGCTTAAGCAAGCAGCTT TGGTTAAAGAAAGGAATAGGGATGCAAAGATAGCCTTGGATTTGGATAGTAAGCCACTGGAAAATGCTGAATTCAGCAATGGGAATTTGTTGAATTTGGC TTATGATCGATGTGGTGAAGTTTGTGCTGAGTATGCTAAGACATTTTATCTTGGTACTTCTTTCTCTATCTCTTCTTCTTTTCCAACTTCTCTCATTCAT TGTCCCTCTCTCAAATGAGTTTAGTGGAATTTGGCTTAAATTTCTCTCAACTTATCAAATATCCTAATATCAACTTAACCTACAGAAATCTTCCTATTAT ATACTACCATGTACCATTTCATTTATCAGAAATATTCATCTTATCAAAAATATTATATGTTTATCTGACAAGAGAAGTGATAACTAATAGTAATATAGAT TTCTATTGATTATTAATGCCTCATATGTTGACTTATTTTGAGGTGAATAAATTAGTGTAATGGTGTTGTGCACTTGACTTAGAGAAATGATTCTTTACCA TTGATTTGGAATTGAGAATCTGGTTAGACCAGTATCCTTGAACCATGTAATAATTTCGATGCGACTTCTCTTCTAACTGGAAATTGTAGGCACACGATTG ATGACCGAAGAGCGCCGAAGAGCCATCTGGGCAATCTATGTGTGGTGCAGAAGAACTGATGAGCTAGTTGATGGTCCAAATGCTTCATACATCACTCCTT CGGCATTGGACAGGTGGGAGCAACGACTAAACGATGTCTTTCAAGGTCGTCCTTTCGATATGTACGATGCTGCCCTCTCGGACACTGTCACTAGGTACCC TGTAGATATACAGGTATAATCCATAAATGCCCAAAAATTATATCAAATTCTCATTCTTTTCTTTAACATGTAACATGTCTAATGGGTTGCTTAAAGTTAT ATATATTTTCATGTAATTGTTGCTCAAGTTATATGGATAGAGAAATAAAAGAAATTGGATTTTGGTTACGATAGAAAGGAGAGTAATGCTTACACAAATA TGCATAAGAAATTTGTCTATTTAAGTTTAATCTATCTTGATGGAATTATAGAAAGCACTTTAACCTTTTCGTTTCATCGAATAGCCTTTCAAGGACATGA TAGAAGGGATGAGGATGGACCTGAGAAAGTCGAGATACAATAATTTCGATGAGCTCTACCTTTACTGCTACTATGTTGCTGGGACAGTGGCTCTTATGAG TGTTCCTGTAATGGGCATAGCTCCTGAATCTAAGGTTTCAACTGAGAGCATTTATAATGCTGCATTGGCACTAGGCATTGCAAATCAACTTACCAACATA CTCAGAGATGTTGGAGAAGAGTAAGTTTCTTTGAACACATCAATGTCATGTATAGAATTGAACCAAAAACAATTATGTCATTTAATATACCAGGCCTAGA ATATCATTTAATCTCAAGTATGAATCGTTGAATCCAATTGAACCGAAAATGCTACATATGCACATTTATGCATATATAATATATCACCTCAAATTTGTAA AATTTCTACCATTTGATTATTGGTTATCCCTACACATCTACCATATAGTATATACATATGCTCTTGTTTTGTAAACTCACAGAAATGTGATATATTTCTA CAATGGTTAATGAATAGAAAGATACGAGGCCAAGTTAATAAATATAAGAAACTAGAACACTTACTTTGCCTACTTTTGTCTTTCTTATCATTACAGTGCT AGGAGAGGCAGAGTATATCTCCCACAGGATGAATTGGCAAAGGCTGGCTTATCCGATGAGGACATTTTCTCTGGGCAGGTAACCGACAAATGGCGGAGTT TCATGAAGGGCCAAATAAAGAGGGCAAGGAAGTTTTTCGATGAAGCAGAGGAGGGAGTTACACAGCTTGATGCAGCTAGCAGATGGCCTGTGTGGTCATC ATTGTTGTTGTATAGACAGATCTTAGATGCTATTGAAGCCAATGATTATAATAACTTCACAAAAAGGGCTTATGTTGGAAAAACAAAGAAGCTATTATCA CTACCTGCTGCTTATGGTATAGCTCTCATAGGCCCTCAGAAGTTAAGCAAGATGGTTTTGGGATGAATGATGAATATTATAATGTGCCCATTGCCCACGA TCAATTTGAAAAATTCTGTTGCATAGAGTATAGGTTGCTACAACTACATACCTCTCTTGGATTAGAATTGTTTACTTATTTAATTACTGGACAACATGCA AGTATGCAACAGTAGTAATAAATCACATATTCTTTAAACTTAGAAGAAAACTTTAATTTCTTTTTATTCCATAGGCAAGTAAATCTAGATTTCTAGCTGA GGAAAATGGACCTGTGGCTTCACCTTTGTGGTAGCACACTTGGTTCATTTGCTCAATGTGCTTGAGCAAGAAAGGTCTAATCTGATAACATTTTTTAAAA CATTCATTCACAAATGTTCATATTATGAGTGTTCATATATTAGAACTCATTTGAGAAACATCCCCTGAATGAAGTGCCATCTGAATAGGTTAATGTAACT TGCATGTGATACTTGGTGTAAATGATCTTCTTTTCTGTAGAGAATGCACACTGGTGAGTGGTGACTCCTTTCATATGAAACAAATCTTGTGTTTATTTCA TGAATACTTTAGCCAGAAAATTTGCACAATCAATCTTAGCATGGGATAATAGGAATCAAACCATGGAAACTTGTGTCTTGAGGGAATGGTTCATTTGACA CATATATTAATATTACATGAGTGATACTCCTACTTTGAAGGAACATATATTTCTAGTTTTCTACCTTCCTTTCTTTTGATCCAAGCAAGAACATCAAGCT AGTAAAATTCTCCCATGTTATTG BLAST |
Tissue | pods |
Gene name | LI_gene_165308; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_435870
Blastp | Phytoene synthase, chloroplastic from Daucus sect. Daucus with 60.47% of identity |
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Blastx | Phytoene synthase, chloroplastic from Cucumis with 80.53% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019435350.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |