Ll_transcript_436570

• Id Trinity: TRINITY_DN48949_c0_g1_i22
• Name Transcript: Ll_transcript_436570
• Sequence: CAGCAAATACCTTAAACTCTCCGACTACAGAACACATCATCAAACATCACACATCACACATCATTACACATCACATATTAGACGTGTTAGTGTGGTAGGT CGCAAGTGAGTTCTAAATAGTAGATATACTAATTCTAGTAATTGTGTTTTCAGCACAACTTCGTAATTGACGGTGACATTGTTCAGTGTTCTAGTTTTTT CCGGTTCAGGAGAATCGTCACTCACTTTTCCTTTTCTCAAAAATTCGAAGAAAGGGGAAAGGAAAAAAAACAATTTTGTCACTCAAACAGAACAAAAAAA CCGAATACTATACATGGATTCATTGCTTCTTGGATCTTTTCCTAAACCATCTTCACTTACTATTGGTTCTCATGCACCAACAGCTTCATGGCACAAAAGA AAGATCCAAAAAGAACATAATTTTTTGAGGTTTAAGCAGCTAAGTTTGAATCATACTTACAAAGGCATTAAGGGTGGGTGTACAAGTCAAGAATGCAGTA GAAAATATGTTGTGAAAGCGGCCTCTGAACAATCATTTGAGTCTGAACCTCAAGCTTTTGATCCAAAAAGCATTTGGGTCTCAGCCAAAAGTTCCTTGGA TGCTTTCTACAGGTTTTCCAGGCCACACACAGTTATCGGCACAGTTAAGTACAAGCTTTTCTGGAATCACTCTTAGAACTAATACTCGAATCTTATGGTC AATACTTAATACAATTCGTTTGTGTGAACCACTTTTTTGGATACCTGTAATATTCTAAATGTTTTAAAGGGACTCACTTCGTATGTGCTTGGGCAGGCGT TAAGCATAATTTCCGTGTCTGTCCTAGCAGTACAGAAAACATCAGATTTGTCTCCACTATTTTTTACTGGAGTGTTGGAGGCTGTGGTAGCTGCCTTGTT TATGAATATTTATATTGTTGGTTTGAATCAGTTGTCTGATATTGAAATAGACAAGATAAACAAGCCATATCTTCCATTGGCATCTGGAGAATATTCCTTT CAAACCGGTGTCATTATTGTTGCATCCTTTTCAATTCTGAGTTTTTGGCTTGGGTGGATTGTAGGTTCGTGGCCTTTGTTTTGGGCTCTTTTTGTCAGTT TTTTGCTAGGGACGGCTTATTCAATCAATGTACCCTTGTTGAGATGGAAGAGATTTGCAGTGCTTGCAGCGATGTGCATTCTGGCTGTTCGGGCAGTAAT AGTCCAACTTGCATTTTTCCTTCACATTCAGACTCATGTGTACAAGAGGCCAGCTGTCCTTTCAAAGCCGCTCATTTTCGCTACTGCATTCATGAGCTTC TTTTCTGTAGTTATAGCATTGTTCAAGGACATACCTGACATTGAAGGAGATAAAATATTTGGCATCCAATCATTTTCAGTACGCTTAGGTCAGAAGAAGG TATTCTGGATTTGTGTTTTACTTCTCGAAATCGCTTATGGCGTCGCCCTCCTGATGGGAGCAGCATCTCCTTTTCTCTGGAGCAAAATTGTCACGGTGCT AGGACACGCCGTTCTGGCATTGGTTCTCTGGTATCGTGCCAAGTCTGTAGATTTGAAGAGCAAAGCTTCCATAACATCCTTCTATATGTTCATTTGGAAG CTTTTTTATGCAGAGTACCTTCTCATACCTTTAGTTAGATAAGGATGCAGCAGCACTGTAACTTGAGAGTTAGTTTTGGTTAGATTGGTGCTGCCTTTAT TATTACAAATTAAACTTGAGAATTACTCTCTAAATTAGTCTAAAGTTTTTAATTGGCAATTGTACATGAAGAATTATTTCTTTTGAGATGATTTTTGTTA TTCCCATTCTTGTTTGCCTGATAAAATGGATAGTTGTGTGCCTTGATTTGAGCCCAAACTTGAGGAAATTATTCTGAATTCTCTGCACTTTATCCACCAA GATTATGATTGAATGGAATAGAACATGATGAAATGAAATAAAGATCTCATATTATTG
• Tissue: pods
• Gene name: LI_gene_165310;
• Additional information: details;

Expression of Ll_transcript_436570

FPKM

• PAB: 0
• PNAB: 0.6
• PS1: 0.4
• PS2: 0.2
• PS3: 0.3
• PW1: 0.2
• PW2: 0.1
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_436570

• Blastp: Homogentisate phytyltransferase 1, chloroplastic from Arabidopsis with 79.67% of identity
• Blastx: Homogentisate phytyltransferase 1, chloroplastic from Arabidopsis with 66.58% of identity
• Eggnog: Synthesis of 3-octaprenyl-4-hydroxybenzoate (By similarity)(COG0382)
• Kegg: Link to kegg annotations (AT2G18950)
• CantataDB: -
• Mirbase: gma-MIR5761a (MI0019702)
• Ncbi protein: Link to NCBI protein (XP_019442394.1)
• Pfam: UbiA prenyltransferase family (PF01040.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;