Ll_transcript_438223

• Id Trinity: TRINITY_DN48951_c1_g1_i12
• Name Transcript: Ll_transcript_438223
• Sequence: GTTTCCGATAAGCTGGGTCATTGTTCGAATGGAACAAAACATCAACACCACCACATCTTCTTCTTCTTTCATCTCTTCTCATCTTCAACTACTTTGAGCT TTAGTTAACTTTCATTTTCTCTTTCTTTCTACCCTTTCACTACACACACCGTCTCTTTTTCTATCTCTAGAAAATATTAATAATAAATCACACAATTCTC ATATGCCCGGATTTTTCTTTCACTTTCTTTCTGTTGCTCACCCACCAAACATTAACCAACCCTAGAGAACACTTCATTTTCCTTCTTCTCTCTCATTTTC ACAGAGATATTAAGCAACTATGTACGTCTGAGACACAAGGAAATATCATTTGGAAAACTCAACAACTCCTGAAATCTGACAACAAACAAGGTAATGGAAA AGCTATAAATACAAGCTGAATCAAAAAAGTATTTTGCTCAGATCGGATACCCATCAGCAAAATTTTCTGATTTAGCTTCAATACAAAGCAGAAAAAGGAT TAGATCAAAGGGAGGAGAGGGAAGAGTATCTGAGACATATTTTCAGTCTTAGCTTCTTTTAAAAGGATTCTGCAAACTGCAAAAAACTTAACAAGGGTCT CTCTGACTTGGACTGTGATATATCAAAAAAGCCTTTTTATCACTTCACAATACACAACCAAAACAGTGTCTGAATTATCATCATCAATGCAAAAGGACAT AACCAACCCCACCCCACCCCACCCTCTAGCACTCTCTCCACTTCAATTTCCACACTCCCTACTACTTACTGCTTTTCTCTCTCTATCTCTAAAAAGGAAT AAGTAAGGAGACAAGGTAATAAAGAGAAAGGCAAAGAGTGATTGTTTTGTTTTGTTTTGTTTCTAGCTTGATCAGCTTCTGTTCTTTGGAAAGGCTATGA TTTTGGTATGGAGGAGGATGAGATTCAAGCACATGCAAGTAAGTTCCCAAGAATTGGAAATGGAAGAAATGATTCCTCTAACAAGATAGGTACTAGAGGA GGATTAGGGAGTGGTGAGCAACAACATCAAATATATGAGGAAGTAGATGGAGGAGGCTCAACAAACAGGTTCCACAGTTGGCACCACTCTTCAAGAATCA TAAGGGTGTCTAGAGCATCTGGTGGGAAAGATAGGCACAGCAAGGTCATGACCTCAAGGGGCTTAAGGGACAGAAGGGTTAGGCTTTCTGTGGCCACGGC TATTCAGTTCTATGACCTTCAAGACCGCTTGGGTTTTGACCAACCAAGTAAAGCAGTTGAATGGTTAATCAAATCAGCTTCTGATGCAATTTCTGAGTTA CCTTCATTGAACAACACTTTCCCTGATACCCCTAAGGAACTGAGTGTGGGAATTGAACAAGGATTTGATTCAGCTGAAGCAGAAATAGAAGGTAATACCA ATTATCATAATCAGCAGCAGCATCAGCATAACAACAATCAAAGCCAGAACCTTTCTTTGTCGAAGTCTGCTTGTAGCAGCACTTCTGAGACAAGCAAAGG TTCTGGCTTGTCCCTCTGTAGGCCTGATGTACGCGTTAATCGCATCAAGGCCAGAGAGAGGGCAAGGGAAAGAACAGCAAAAGAGAAAGATAATGAAACT CTCAACAACAACATTGCTCATCATGTGAATATGAACAGCAACCCCATTTCTCAAACATCTTTCACTGAGCTACTCACAGGTGGAATCAACAATGCAGTGC CCACCACAACTAGTCCTAATAATAATGATTCAATTAGGAACCAAAACCAAAACCAATGGTGTTCAACAGCACCAATGGATTACTTCACCTCAGGGCTTCT AGGACCTTCCTCTTCTTCAAGAACCAATACTTCTGGATTCTCACAGATTCAATTAGGACATTCCCTTCCTGAGGCCATGCAAGTTTCACTTTCACCATTC AGTCTCAGTAGTAGTGATCATAATCAAAACCACTCATCAGACCAACAACTTCACCATCATTTATCATTCATTCATGATCATCTTATGCCAGCTATGGTTA CTTCTTCTTCATCCTCTCATCAACATCATCAGCCCAATCATGACTATAATCTCAACTTCACAATCTCACCGGGCCTTGCTGGTTATAATAGGGGGACCCT TCAGTCCAATTCACCACCTCATATGTTGCCTCAACACAATCATATGCAGAGGTTTTCATCATCACCTATAGATGGATCCACTGTACCTTTCTTCATTGGA GCTGCTTCTGCTGCTGCTTCTTCAGCTTCAGCTTCAACCATGGAGAACAATCATCACCAACAACAACTTCATTTTTCACCTATTTTTGATGGCCGTGGCT TGCAACTATGCTATGGAGATGGAACCAGGCATTCAGACCAGAAGGGAAAAGGCAAGAACTGAGTTTCAGGAACATTTCCTTCCTGGACTCGAAAGATAGA GAGTGCAAGCTGCAAGTTGTGTCACAAAAGCTTGGTGCCTTACCAAAAGGAGTGACAATGTTGTTATCAAGTGTTGGTTTTTCTTGTTGGGTCGTTTTGA AGTCACTCAATTACATCCAGTATTTTTTGATATAATATTTGATCTATGCGTGCAAAATCATTGTGTGTTTTGTAGAAATGTAAAAAATACTTGATTCAGG TTTTTATTTTGCTGAAATTCGTATTTTCCCTGGCTACTAATGAAGAGTTTTCACTCAATCGTGTCCATCCGATTTTCTTCACTAGTAAATTCTTTCAGGG TTAGATTTCTTCACTAGAAAACCTCTGTATACTTTAACAGATAAGCACAGTACCTTGCACCATCCTTTTATAAGTTTTTTGTCACATGCTTTATAACTAT CTACTTCGAATTGAAATAATGGCTTTCTCATTTGAGT
• Tissue: pods
• Gene name: LI_gene_165325;
• Additional information: details;

Expression of Ll_transcript_438223

FPKM

• PAB: 5.3
• PNAB: 7.5
• PS1: 6.9
• PS2: 2.2
• PS3: 4.7
• PW1: 4.8
• PW2: 7.2
• PW3: 3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_438223

• Blastp: Transcription factor TCP2 from Arabidopsis with 40.84% of identity
• Blastx: Transcription factor TCP2 from Arabidopsis with 84.27% of identity
• Eggnog: Transcription factor(ENOG410YEYG)
• Kegg: Link to kegg annotations (AT4G18390)
• CantataDB: Link to cantataDB annotations (CNT0001483)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019464085.1)
• Pfam: TCP family transcription factor (PF03634.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;