Id Trinity | TRINITY_DN48951_c1_g1_i15 |
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Name Transcript | Ll_transcript_438227 |
Sequence | ATTTACTTTGGCCCTTTATTATTTTCAAGAAAATCAATTTGGTCTTCCACCATTACAAACATTGGTCTTAATGCAATATTCTTCATCATTCTTAGGCTCC ATCTCAAAACTTGATTGTTTATCTTCTTCAGTATTTTCTCCCTCACCAGACACTTGATCGTACTCTATTGGTGAAAATAGAAAGCAACAAACAAAGCAAA TTGGGGAAGTTGGAGTTCGTGATTTGTGATGACGACACAATAACTTCTTGCATATGGTAATGTTCTCTGACGAGCTCGTGATTTGCGATCGAATTTGGTC TCAGACGCATCTTGTGTACGTCTGAGACACAAGGAAATATCATTTGGAAAACTCAACAACTCCTGAAATCTGACAACAAACAAGGTAATGGAAAAGCTAT AAATACAAGCTGAATCAAAAAAGTATTTTGCTCAGATCGGATACCCATCAGCAAAATTTTCTGATTTAGCTTCAATACAAAGCAGAAAAAGGATTAGATC AAAGGGAGGAGAGGGAAGAGTATCTGAGACATATTTTCAGTCTTAGCTTCTTTTAAAAGGATTCTGCAAACTGCAAAAAACTTAACAAGGGTCTCTCTGA CTTGGACTGTGATATATCAAAAAAGCCTTTTTATCACTTCACAATACACAACCAAAACAGTGTCTGAATTATCATCATCAATGCAAAAGGACATAACCAA CCCCACCCCACCCCACCCTCTAGCACTCTCTCCACTTCAATTTCCACACTCCCTACTACTTACTGCTTTTCTCTCTCTATCTCTAAAAAGGAATAAGTAA GGAGACAAGGTAATAAAGAGAAAGGCAAAGAGTGATTGTTTTGTTTTGTTTTGTTTCTAGCTTGATCAGCTTCTGTTCTTTGGAAAGGCTATGATTTTGG TATGGAGGAGGATGAGATTCAAGCACATGCAAGTAAGTTCCCAAGAATTGGAAATGGAAGAAATGATTCCTCTAACAAGATAGGTACTAGAGGAGGATTA GGGAGTGGTGAGCAACAACATCAAATATATGAGGAAGTAGATGGAGGAGGCTCAACAAACAGGTTCCACAGTTGGCACCACTCTTCAAGAATCATAAGGG TGTCTAGAGCATCTGGTGGGAAAGATAGGCACAGCAAGGTCATGACCTCAAGGGGCTTAAGGGACAGAAGGGTTAGGCTTTCTGTGGCCACGGCTATTCA GTTCTATGACCTTCAAGACCGCTTGGGTTTTGACCAACCAAGTAAAGCAGTTGAATGGTTAATCAAATCAGCTTCTGATGCAATTTCTGAGTTACCTTCA TTGAACAACACTTTCCCTGATACCCCTAAGGAACTGAGTGTGGGAATTGAACAAGGATTTGATTCAGCTGAAGCAGAAATAGAAGGTAATACCAATTATC ATAATCAGCAGCAGCATCAGCATAACAACAATCAAAGCCAGAACCTTTCTTTGTCGAAGTCTGCTTGTAGCAGCACTTCTGAGACAAGCAAAGGTTCTGG CTTGTCCCTCTGTAGGCCTGATGTACGCGTTAATCGCATCAAGGCCAGAGAGAGGGCAAGGGAAAGAACAGCAAAAGAGAAAGATAATGAAACTCTCAAC AACAACATTGCTCATCATGTGAATATGAACAGCAACCCCATTTCTCAAACATCTTTCACTGAGCTACTCACAGGTGGAATCAACAATGCAGTGCCCACCA CAACTAGTCCTAATAATAATGATTCAATTAGGAACCAAAACCAAAACCAATGGTGTTCAACAGCACCAATGGATTACTTCACCTCAGGGCTTCTAGGACC TTCCTCTTCTTCAAGAACCAATACTTCTGGATTCTCACAGATTCAATTAGGACATTCCCTTCCTGAGGCCATGCAAGTTTCACTTTCACCATTCAGTCTC AGTAGTAGTGATCATAATCAAAACCACTCATCAGACCAACAACTTCACCATCATTTATCATTCATTCATGATCATCTTATGCCAGCTATGGTTACTTCTT CTTCATCCTCTCATCAACATCATCAGCCCAATCATGACTATAATCTCAACTTCACAATCTCACCGGGCCTTGCTGGTTATAATAGGGGGACCCTTCAGTC CAATTCACCACCTCATATGTTGCCTCAACACAATCATATGCAGAGGTTTTCATCATCACCTATAGATGGATCCACTGTACCTTTCTTCATTGGAGCTGCT TCTGCTGCTGCTTCTTCAGCTTCAGCTTCAACCATGGAGAACAATCATCACCAACAACAACTTCATTTTTCACCTATTTTTGATGGCCGTGGCTTGCAAC TATGCTATGGAGATGGAACCAGGCATTCAGACCAGAAGGGAAAAGGCAAGAACTGAGTTTCAGGAACATTTCCTTCCTGGACTCGAAAGATAGAGAGTGC AAGCTGCAAGTTGTGTCACAAAAGCTTGGTGCCTTACCAAAAGGAGTGACAATGTTGTTATCAAGTGTTGGTTTTTCTTGTTGGGTCGTTTTGAAGTCAC TCAATTACATCCAGTATTTTTTGATATAATATTTGATCTATGCGTGCAAAATCATTGTGTGTTTTGTAGAAATGTAAAAAATACTTGATTCAGGTTTTTA TTTTGCTGAAATTCGTATTTTCCCTGGCTACTAATGAAGAGTTTTCACTCAATCGTGTCCATCCGATTTTCTTCACTAGTAAATTCTTTCAGGGTTAGAT TTCTTCACTAGAAAACCTCTGTATACTTTAACAGATAAGCACAGTACCTTGCACCATCCTTTTATAAGTTTTTTGTCACATGCTTTATAACTATCTACTT CGAATTGAAATAATGGCTTTCTCATTTGAGT BLAST |
Tissue | pods |
Gene name | LI_gene_165325; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_438227
Blastp | Transcription factor TCP2 from Arabidopsis with 40.84% of identity |
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Blastx | Transcription factor TCP2 from Arabidopsis with 84.27% of identity |
Eggnog | Transcription factor(ENOG410YEYG) |
Kegg | Link to kegg annotations (AT4G18390) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019464085.1) |
Pfam | TCP family transcription factor (PF03634.12) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |