| Id Trinity | TRINITY_DN48951_c1_g1_i16 |
|---|---|
| Name Transcript | Ll_transcript_438229 |
| Sequence | GTACGTCTGAGACACAAGGAAATATCATTTGGAAAACTCAACAACTCCTGAAATCTGACAACAAACAAGGTCTCATGTTTTTCCTTCTCTATAATGAAGA AACTTTGATCTCTCTCTGATTTTTGTTACCATGGTTTTCATCTTCTATTTCTTTCTTTTTTCTGTTAATAAAATGATGGTACTAATTTGAAGAAAAAAAG AGTCTTTTAATGAGCTGAAAATTTCAGGTTATGTTTATTATTTTATAAAAAAGTTCTTGTTTTTTGGTTTTGTTTAAATGTTTGAAACTCTAGGTACACA GATCTGTGAGCAGTGGGAAGATGAGACAGCACAAATTTGTGTTAATGTGTACCTAAAAATGTTTTTGTTTATCTTCTTTCTTTTCTGTCTTTGGTTGAGA GCTTAACACCTGTCAAAAATCCAATCCAACATTGTTCAAATTAATGTGGGTTGAACCCTTTTTAATCCTTTTATTTAAGATCAAACTTATGAACTTAACA CCTGTCAAGACTATTGAGCATTTCAGAAATAGTGGTTTTATTAAATAATTTGCAAAACAGCCATAATGGAACCTAGTTTGTGGTGTGGCTTCTAATTAGC TTTGCATAATGTATGCCTTTTTTAAGGTAATGGAAAAGCTATAAATACAAGCTGAATCAAAAAAGTATTTTGCTCAGATCGGATACCCATCAGCAAAATT TTCTGATTTAGCTTCAATACAAAGCAGAAAAAGGATTAGATCAAAGGGAGGAGAGGGAAGAGTATCTGAGACATATTTTCAGTCTTAGCTTCTTTTAAAA GGATTCTGCAAACTGCAAAAAACTTAACAAGGGTCTCTCTGACTTGGACTGTGATATATCAAAAAAGCCTTTTTATCACTTCACAATACACAACCAAAAC AGTGTCTGAATTATCATCATCAATGCAAAAGGACATAACCAACCCCACCCCACCCCACCCTCTAGCACTCTCTCCACTTCAATTTCCACACTCCCTACTA CTTACTGCTTTTCTCTCTCTATCTCTAAAAAGGAATAAGTAAGGAGACAAGGTAATAAAGAGAAAGGCAAAGAGTGATTGTTTTGTTTTGTTTTGTTTCT AGCTTGATCAGCTTCTGTTCTTTGGAAAGGCTATGATTTTGGTATGGAGGAGGATGAGATTCAAGCACATGCAAGTAAGTTCCCAAGAATTGGAAATGGA AGAAATGATTCCTCTAACAAGATAGGTACTAGAGGAGGATTAGGGAGTGGTGAGCAACAACATCAAATATATGAGGAAGTAGATGGAGGAGGCTCAACAA ACAGGTTCCACAGTTGGCACCACTCTTCAAGAATCATAAGGGTGTCTAGAGCATCTGGTGGGAAAGATAGGCACAGCAAGGTCATGACCTCAAGGGGCTT AAGGGACAGAAGGGTTAGGCTTTCTGTGGCCACGGCTATTCAGTTCTATGACCTTCAAGACCGCTTGGGTTTTGACCAACCAAGTAAAGCAGTTGAATGG TTAATCAAATCAGCTTCTGATGCAATTTCTGAGTTACCTTCATTGAACAACACTTTCCCTGATACCCCTAAGGAACTGAGTGTGGGAATTGAACAAGGAT TTGATTCAGCTGAAGCAGAAATAGAAGGTAATACCAATTATCATAATCAGCAGCAGCATCAGCATAACAACAATCAAAGCCAGAACCTTTCTTTGTCGAA GTCTGCTTGTAGCAGCACTTCTGAGACAAGCAAAGGTTCTGGCTTGTCCCTCTGTAGGCCTGATGTACGCGTTAATCGCATCAAGGCCAGAGAGAGGGCA AGGGAAAGAACAGCAAAAGAGAAAGATAATGAAACTCTCAACAACAACATTGCTCATCATGTGAATATGAACAGCAACCCCATTTCTCAAACATCTTTCA CTGAGCTACTCACAGGTGGAATCAACAATGCAGTGCCCACCACAACTAGTCCTAATAATAATGATTCAATTAGGAACCAAAACCAAAACCAATGGTGTTC AACAGCACCAATGGATTACTTCACCTCAGGGCTTCTAGGACCTTCCTCTTCTTCAAGAACCAATACTTCTGGATTCTCACAGATTCAATTAGGACATTCC CTTCCTGAGGCCATGCAAGTTTCACTTTCACCATTCAGTCTCAGTAGTAGTGATCATAATCAAAACCACTCATCAGACCAACAACTTCACCATCATTTAT CATTCATTCATGATCATCTTATGCCAGCTATGGTTACTTCTTCTTCATCCTCTCATCAACATCATCAGCCCAATCATGACTATAATCTCAACTTCACAAT CTCACCGGGCCTTGCTGGTTATAATAGGGGGACCCTTCAGTCCAATTCACCACCTCATATGTTGCCTCAACACAATCATATGCAGAGGTTTTCATCATCA CCTATAGATGGATCCACTGTACCTTTCTTCATTGGAGCTGCTTCTGCTGCTGCTTCTTCAGCTTCAGCTTCAACCATGGAGAACAATCATCACCAACAAC AACTTCATTTTTCACCTATTTTTGATGGCCGTGGCTTGCAACTATGCTATGGAGATGGAACCAGGCATTCAGACCAGAAGGGAAAAGGCAAGAACTGAGT TTCAGGAACATTTCCTTCCTGGTAAGACAATAATAATATTAATTCTCTTTTTCTTCATTTAAGGCTTCAAATATATAAAACTCTTGTTTTTTTTATGTCT GGGTTGTTGTTTGAAGTAGGTGTTTGATCTAGTGTATTATTGGTTGAGTTTTGTTAACCTGTTCCAATATGCAATGTTAATAGACTTGTTAGAAGAGAAT ATAATGTGTTTTATCATTTAAATAAAGAATAACATACAGACTAATTCATTTTAATTGATGTTATGTTCATACACCAAATGCTGCTTCGATAATACGATAA TTTATCAGACTATTCTATTTCACATTTATGTCTAATATATTTATTGTAATAGAAAACAGTAAGTGTATATTTAAAATATTTAAATAATGAATGCCTTCAT TTTTATTTAATATTTTTAGGGAAATGTACTGTTAACCTATACTTCTAATACACTAATAAAACAAACATAGCAAATGTGGATAGAGAATGGCTGAATCAGT GTATATATATTTCAAAGTAATATTTTTTAGTTTGATTCTTAAATAATGCTGGTAGAGCAATATCAGGTTTGTTTTATTTGCAATGCTGACTAATTTTCTT TCTTCTGGAACGACATGTTTTGCCTATGGTAAACCTAGGTGGACATGCCATGACATTAAATATTCAATTCCATTATTGTAAATCAAATTTTGGATATGAT ATTTGACATCTATTTTTATCTACCCTTGTTCTTAAAATAAAAAACATTACACAATATAATGATATCCAAATTTTGGCAAGTATGAAACATTTTTCCTTAA ACATTTGTCTGCGTTTCTTCATTTCATTTGAACAATGATGTTAGTTTTTTGGATGTAAGTGTAATACTGTAATGTGCAATACCACGAGCCGTTTGCTTTC TTGGTAATCATAAACAATATGGCCATTGGGGCATATATATGCATATATATGGTTTTTAATGTCTTTTTGTTGATTCCTACATGGGTTACCGTGATTTGGG GCATTCATTGGTTGTCTCCTTGTTTGTGCTCTTATTGGTTC BLAST |
| Tissue | pods |
| Gene name | LI_gene_165325; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_438229
| Blastp | Transcription factor TCP2 from Arabidopsis with 40.84% of identity |
|---|---|
| Blastx | Transcription factor TCP2 from Arabidopsis with 84.27% of identity |
| Eggnog | Transcription factor(ENOG410YEYG) |
| Kegg | Link to kegg annotations (AT4G18390) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019464085.1) |
| Pfam | TCP family transcription factor (PF03634.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |