Ll_transcript_438208

• Id Trinity: TRINITY_DN48951_c1_g3_i1
• Name Transcript: Ll_transcript_438208
• Sequence: CTTACTTCATAGCATAACTACCCACTTTCACTTTCTCTTTCTCTTTCTCTTTCTCTTTCTTTCAAACACAATCACTATACAAACACAAAATCAACTGTAC ACAGATCGGTGAGCAATGGGAAGAAGTCACTGAATCACTGCAATTTTGTAATCAACACTAGGGAGTAAAAAAGGGCCTTTTTATCACTACACAGCCAAAG CCAAAGTACTGTCTGAACTATCATCATCAATGCAAAGCACATAGTCACATATCAACCCCACCCTCTTTACTTTTCACTCTACTTCATGTTTTAACATTAA AATAAAATAAAAAGAAGACAAATGGTGTGTGTAGCTTGAGCTTCTTGTGTTAACAAAAAAGGCATGATTGTGATATGGAGGAGGATGATGAGATTCAAGC TCAACAGGCATGCAAGTTTCCAAGAACTGGAAATAAAAGAAATGAGTCTAGCAAATTAGGTGGTGGTGGTGGTGGAAGCACAAACTGTTTCAACAGTGGT AGCAATTGGAACAATGCTTCAAGAATTGTGAGGGTATCTAGAGCCTCTGGTGGAAAAGATAGGCACAGCAAGGTTATGACTTCAAAGGGGTTAAGAGATA GAAGGGTTAGGCTTTCTGTGACCACAGCCATTCAATTCTATGACCTTCAAGATAGACTTGGTTATGAACAACCTAGCAAAGCAGTTGAGTGGCTAATCAA TGCTGCTTCAGATGCAATTTCAGAACTTCCTCCTCTCAACACAACTTTCCCTGATACCCCAAATCAACCAAGTGATGAGAAAAGGCCATGTTTTGATGAG GTAGATGGAGTCACAAACAACTATCAAAATCAAAACCAAAGCCAAAGCCAAAGCCAGAACCTTTCTTTGTCCAAATCTGCTTGTAGCAGCACTTCAGAGA CAAGCAAAGGTTCTGGCTTATCCTTATCAAGGTCTGAGATTCAGGTTAAAGCAAAGGAAAAAGCAACAAAGGATAAAGAAAAAGAAAATGAGTCATCTCA TATTGCACATCATCATCAGCATCATAATGTGACCCAAACTGCTTCTTTCACTGAGCTTCTCACTGGAGGAATTGGTAATGTTGCTACCAATACAACAAGT CCTAATGGTGCAGGTGATGAGACTAATCTATTCAACAAGGCAAAACAATGGTCACATGTGGCCATGGACTACTTCAACTCAGGCCTTATGGTGGGTCCAT CATCATCTTCAAGAAATGTTTCACCATTTGGTGCTGAAAACCAATCAGATCAGCTTCAGCATTTCCCTTTCATCACTGACCATAATTTCATACCTTCTTC TCAGTCAAGTGGAAATGATTACAATCTCAACTTCACAATTTCTCCTGGCCTTGTTGGTTATAATAGGGGGACCCTTCAGTCCAATTCAACATCTCATATC ATGCCTCATATGCAATTCTCTGGATCAACCAATCTACCTTTCTTCATAGGAGGAGAAGCTTCTCATTCAGCTTCTGCTGCTCCAACCATGGATGCTACTA ACCATCACCAACAACATCAACAACAACAACAACTTCAGTTCTCACCTGTGTTTGATGGACGCTTGCAAATCTGCTATGGAGATGGAACCAGACATTCAGA CCAGAAAGGGAAAGCCAAGAACTGATGATTCTTGGAATATCACATTTCCCTATATCTTCATTCCTGGAGGAGCAACTTGTGTCTCAAGCTTGCCATTTTC AAAATGGAGGGTATGTTGTTATCATCAAGTGTTGGTATTTCTTCTTGGACCATTTTGACTCATTAACTTGCATTGAGTATTTGGATATCTAGTGATTTAT GCGTGAAGAATTATTTTGGAGGAATGTAAAAGAAACTTGATTGAAATATTTTTGCTTCCTACAATTGTTTTGAACTTGTGTCCACTGTTTGTTGAAAAAA ATGCTGTAAATCAGTCCATTAGAAGGTGCAAATTATTTTGTAATTTTTACAATGGTAATTCTTTCTTATCCCACAGTCATGCCTTCTAACATTTTAGCTC CAAAGAGTTTTTAGTATAATCAAAAGTATTCCTTAATGAATTAATCCGAA
• Tissue: pods
• Gene name: LI_gene_165327;
• Additional information: details;

Expression of Ll_transcript_438208

FPKM

• PAB: 3.8
• PNAB: 35.7
• PS1: 20.5
• PS2: 5.6
• PS3: 9.8
• PW1: 9.7
• PW2: 9.1
• PW3: 6.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_438208

• Blastp: Transcription factor TCP2 from Arabidopsis with 42.89% of identity
• Blastx: Transcription factor TCP24 from Arabidopsis with 73.96% of identity
• Eggnog: Transcription factor(ENOG410YEYG)
• Kegg: Link to kegg annotations (AT4G18390)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019439692.1)
• Pfam: TCP family transcription factor (PF03634.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;