Id Trinity | TRINITY_DN48955_c0_g2_i2 |
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Name Transcript | Ll_transcript_437658 |
Sequence | AGCAAATGGTGGGTGTCTCCATGTTGGATCTTTCTCTCTCTCTCTTTCTTTCTTTCTTCCTTCCCTCAACACTCAAAAACTCACTTTTTTTCTTTTCCAT CACTCTCTTCTTCCCATGTTTCTCTTTGCAACTTCTTCTTCACATTTTCATCTTCTTCTTATTATCAACACATAAATAATAAGCCTTAAACCACTCTTCT TCTTTCTTTTAATTGCAGATTCTATAACGTTCAATCTTCATTTACTCTTTCTTCTTTAACCGTTATCTTATGATATGAACGTTCGTTTCTTTTATCAGTT TCCTTTTCAAGTTTTTCTTCAACTTATGCATATATCTCAATAAATATGCACAACCCTTTTCTTAAAAAGCCTCACTTTTCATTCTTTTCTCTTCTCTGAA ACCAATCTCTTATGTTTTTTTCTTGGCATGTTTATGGGTTAATCTCTAAACACTGTTCAAGGTTGTCAAGTTTCTATAGTTTTTGTGCTTCAGTTTCATC TGGGTAAGTATCTTTCTATATGAATATGAATATCAATGGCAAAACTACTATGTTATTGTCTTTCTGATATGAAAATAGTTATTTGGTTTTTTTCATGTCT TAGAATATTCATTAAGCAAAGAAAACTTTATGATATTGTTATGAAATGACTTTACTTATTTATTTTGAATAGTGCTAAACCTATGAGGATTTTTGTGACA ATTATTCTGATATTTCAGGTTTAGAAATTACACTTGATACCCATGTTATCTTAGAGTTAACAGAGATCAGTGTAATCAACCCATAAATCTCAAAAGAGGT CAATATATTTTTGAAAACATGGAAGATTATTACTATAAGTGTATTATCACTGTAATTTACCCTAAGAATTTTTGTTTCATTCTAGTTTCACAAATTTCTA TCTCACTTTGCTCACTAGAGTGAGTCTCGGCAACAACGGTAAGGTTGCCTCTTAGTGGTCAATAGGTTATTGGTTCAAACCCTGCAAACAGTCTTTTCGT TAAGACTGTGAACATCTACCCTCCCTACCCAGACTACACTATAGGGTTAAGTTTCGGGCAACAAGGGTAAAGTTGCCTCTTAGTGGCCAATAGGTTAGTG GTTCAAACCCTGCAAACAGTCTCTCCAACTGCGGGATAATACTTTGAATATCTACCTTCCCCTACCTTAACACACTCGTTGTGAGCCTGGTACATTGGGC CGTCCATTTATATATATATATGTCTTGCTCTCTTAAACCTCATATTTGAAAGTGATTTTGTTTTGCAGCTACTTATGCCTGGACTATCTTTCTCCTGTCA CAGGCAATTGATCAATCAAAAGTTGAAAAGGGTTTTCTGTGATCAACATTCAGAGATAAAGGAGAGGATAGTGAAGGAGTGCATTTGCATAGCAAAATGG TGTATTAATAACTAGTATAAAAGCATTGTTTGGCATTGGATTTATGGTTAGTTCCTCAAATTCCCCGGCGCAAAAGATGAGACTTCTTGAATTGTCACCC TCTGATGGAAATGGTTCCTCAGAAGAACCTTTACCTCAGGATGCAGATTATAATGGTCCATTTCTCAGTGATGAGTTAGAGACCACAATCTTGGTTAGAA TGCCAAGATCACAGCACTGGAAATTGTGTTTCTTAGATAAGCGCTTCTCGAGTCTGGTGAATAGCGGCGAAATATATAAGGTTCGAAAAGAGTTAGGATT CGTAGAACCATCAGTGTTTATGTTAGCTAGTGGTGAGAGTAACTGGTGGGGAATGGATTGGCCTTTCAAGTCAAGTAGGAAGCTTCCAATTATCCCATCA GATTATAGTTTTAAGTATGGAGATAAGGAGTCTTTCACTGCAGGGTCTCATCTCTTAGTCTCGGGCAAGGAATTCGATGGACCGGTTATTTGGAGGTACG AGTCTGCGACGAATCAATGGCTCAAGGGTCCTTTTATGAACAATCCAAGGTGTCTTTTTGCATCGGCTACTTGCGGTAATTTCGCCTTTGTTGCAGGCGG TATTGACACAAACACTTATAGCCAAGTCTTGGATACTGCAGAGAGATATAATTCACAGAGCAAGTCATGGGAACTTCTCCCGAAAATGAATCAGAAAAGG AAGTTTTGCTCTGGTTGTTTCATGGATGATAAGTTCTATGTTATTGGAGGACAAGATGAGCATCAAAAGGATCTCAATTGTGGAGAATTCTTTGATGCAA ACACAAACAGTTGGAACTTGATTCCTCAAATGTTGAAAGATATTCCTCTTTCGGTTTCGCAATCTCCACCTCTCGTCGCTGTTGCGAATAACCAGCTCTA CACACTTGATTCTTCTTCCAATGAGCTAAAGGTTTATATGAAGGAAAGCAACTTATGGAAGAAACTAGGCCGAGTTCCGGTGAGAGCTGATGCACAAGGA GGTTGGGGTGTAGCATTTAAGTCTCTAGGCGATGAGCTACTTGTAATTGGCGCGCCTTTGGTCTCTCATACGGAGCGCGCCTTGACTATATGCACTTGCT GCCCGGATCCGACTACGGAGAAATTAAGGTGGAGGCAAATTGATTGTGGCAGCATCCAGCTCAATCACTTTATCCATAATTGTGCTGTGATGGGAGGAAC CTGAAATCTCGATTTATGTTAACAAGAAGAGTAATAGTTTTCGAAACTAGCCTCGAAATAAATTTAACTTGCACTTTGCAGGTTAATTTGGAGTTATCTT TTCTTCAAACTTCTATCATTTGATCTGTGTTTGGAAAAGCTTGATGATGTAACTTTTTCCTTTCACTATGATGGAGAGTGAAAATGATAAGTACAATGCA TTGTTGGTTAAGAAAACTAGATAAGAGTGCTGAAAAACTCAAATTCTAATGTGTTTCTGTTTTTCATTGTTCAAGTGTCATGATTTAGTTACTTGTATCA AAAGTTATCATCTTATTTTGTTATGGACCATCAACTTTGAATCATTTCCTTTGATTGCCATACTTCAAAATGCTAG BLAST |
Tissue | pods |
Gene name | LI_gene_165359; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_437658
Blastp | F-box/kelch-repeat protein At3g27150 from Arabidopsis with 53.06% of identity |
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Blastx | F-box/kelch-repeat protein At3g27150 from Arabidopsis with 53.06% of identity |
Eggnog | Kelch repeat-containing F-box family protein(ENOG4110X8D) |
Kegg | Link to kegg annotations (AT3G27150) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019438664.1) |
Pfam | Kelch motif (PF01344.24) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |