Id Trinity | TRINITY_DN48955_c0_g3_i2 |
---|---|
Name Transcript | Ll_transcript_437665 |
Sequence | TTTTTCTTCACTTCTTTATATATTCATGTGTGTCTTGTCTTGTGTGTTTTTTTGTTTCCTTTTGTAAACTTTCTTTAGTGTTCTACATATCTAAGTAACT ATGCACAAACCCCTTGTCCTAGAAGCTTTACTTTCTTCTTTTCATGTTTTTGTGTGTGTCAACTACTGAAAGCTGATCAACCCATGATGTGAAAGCTTGT CAAATTTTCTGCTACTGATTCTGATAGAGTTACAGATAGTTAACAAGGTGTATAAGAAACATAAGGCTTTTTAGTATGTCTAGTAAAAATGCATTACCTA TTTGGAACTTTGGTGGTGGCATTTACCTAAGTTCTCATAATTCCTCACCAGAAAAGATGAGAATTCAAGAATTTCTACCCTCAAATGGAAACAATTCCTC CTCAGGTCAAGAACCTCAGGATGCAGATTATGATGTACCATGTCTCAGTGATGAGCTAGAGACAATGATACTTGCCAGATTCCCAATATCAGAACACTGG AAGCTCTGTGTTCTGAATAATCGGTTTCTCGCAGCGTTGAAGAATGGCGAGATATATAAAATCCGGAGGGAGATCGGGTACAAAGAACCATGTGTATTCA TGCTAGCAAGTGGACAGAGTAATTGGTGTGCTTTGGATGGAAATTTCAAGTCCTGCAAGAAACTCCCTACTATTGTATCAGATTATAGTTTTGAGTATGG AGACAAGGAGTCATTTTCTGCAGGTACCCATCTTTTTGTTTCAGGCAAGGAGATTGATGGAGGTGTTCTTTGGAGGTACGAGTTAGCGGCGAACGAATGG TTCAAGGGTCCTTCGATGAACACTCCGCGGTGCCTTTTCGCGTCGGCCTCTTGCGGTGTATTTGCTTATGTTGCTGGTGGATTTGGTACAACAACTTGTA GGGAAGTTCTAAGTTCTGCTGAGAAATACAATTCAGAAAACCACTCTTGGGAGCCACTTCCAATGATGATACAAAAGAGAAAGTCTTGCTCAGGATGTTA CATGGATAAGAGATTTTATGTGATAGGAGGACAAGATGAGCAATACAATGACCTCACTAGTGGCGAATTCTTCGACGAGGAGACAAACAGTTGGAACTTG ATTCCTGACATGCTGAAAGACATTCCTCTCCCGAGTTCGCGATCCCGATCCCGATCCCCTCCTCTCGTCGCTGTTGCCAATAATGAGTTATACACACTTG ATGCTTCTTCAAATGAGATAAAGGTATATCTGAAAGGAACCAACTCATGGAAGAAGTTAGGACGAGTTCCGGTAAGGGCTGATGTTCAAAGAGGTTGGGG TGTAGCATTTAAGTCTCTTGGTAATGAGCTACTTGTTATTGGTGCTACCTCTATCTCCTATTCTGAGAAGGCATTGACTCTATACACTTGCAGCCCTGAT CCAAGTGTTGAGAAATTACCTTGGAAACAAATTATATGTAGCAGCACCAAACTTAGTCCTTTTATTAACAATTGTGCTGTGATGCTAGCTTGAACATTGA AGTCTAAACTTGCAAAAATAAGCAGAATAGCTTCAAATGAATCACCTAATGATAATAATAATAGTAATAAATAAAAGGCTTGTATGTGCCTTTAACTCAA GCTTCTACTGTTTGACCTTATACACTAAGCCACATGAGTGTGTCACTATGTGAAACTACTTGGATGGCATAGGGTTAATGTTAGGAAGCTTGTTGTTGTA ATTTGTCCCTTTGATATTCACTCTGCAGATAATGAAAATGCAGAGTAAAATCTATTGTTGGTGTAGAAAACCATATGATAACCTTCAAAGTGTCTTTTAT TTATGTTTTGTGTCTCAATTTTCTAAGCCATGG BLAST |
Tissue | pods |
Gene name | LI_gene_165360; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_437665
Blastp | F-box/kelch-repeat protein At3g27150 from Arabidopsis with 51.47% of identity |
---|---|
Blastx | F-box/kelch-repeat protein At3g27150 from Arabidopsis with 51.21% of identity |
Eggnog | Kelch repeat-containing F-box family protein(ENOG4110X8D) |
Kegg | Link to kegg annotations (AT3G27150) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019451474.1) |
Pfam | Kelch motif (PF01344.24) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |