Ll_transcript_437208

• Id Trinity: TRINITY_DN48973_c2_g1_i14
• Name Transcript: Ll_transcript_437208
• Sequence: AAAAAAAAGACTGATAACCTTATCCGCCACCATCAACTAGTTCTGTCCTAAATATCTCTTCAGTGTTTCACACTAACAAACCTCTCTTAAACCCTTTCAC TCTCTCTCGTGTAACAAGTATGCAAATTTCATTGACCAATTCAACCTTCAAGGTCCCTCAAACATTCCCATTTCACCAACCCTTTCTCACTGAGAAGCCA CAGACCCAGCAATTCCCCCTTCAAAAAAACCACTTTCATGTGAATGCCCTTAAAGGGTCATCACGCTATTTATCAGAAATAAGCAAAGCCATTGATCATG AAGAACAGTATCGACAAGCTAGGCAACAGGTTCAGCGTAAAGGTGTGGACTTGGCAGGAATTACCGTTGAGGGTGTCTCTATTGGTGGCCAAGAAACTTG TATCATTATCCCTGAATTCAAGTGTGCTTTTGATATTGGAAGGTGCCCAACAAGAGCTATTCATCAAAATTTCGTTTTTATCACTCATGCTCATCTTGAC CATATTGGAGGGCTGCCAATGTATGTTGCGAGCCGTGGTTTATACAATTTAAAGCCTCCCACTGTATTTGTGCCTCCTTGCATCAGAGAAGATGTTGAGC AGCTGATTGATATTTACAGGAAAATGGGACACGTTGATTTGAATCTTGATTTGGTTGCTTTGGATGTGGGGGAGACATATGAGATGCGAAATAACCTCGT TGTCCGACCATTCAGAACTCAACATGTTATACCCAGCCAGGGTTATGTAATCTACTCTATCAGGAAAAAGCTGAAGAAACAGTACACCCACCTCAATGGA AAACAAATTGAGAAATTAAAGAAGAGAGGCGAAGAGATTACAGACACCATATTATCTCCTGAGGTGGCCTTCACTGGTGATACAACTTCAGATTTTTATC TTGACCCACTTAATGCTGACGCGTTGAGAGCAAAAGTTCTTATAACCGAGGCAACTTTCCTAGATGATTCAACCAGCATAGAGCATGCTCGGCAACATGG TCATACACATATATATGAGATCATGGAGAATGCGAAGTGGATTCGCAACAAAGTGATTTTGCTGACTCATTTTTCATCAAGATATAATATAGAGGATATT CGTCAAGCTGCATCAAAATTGCAGTCCAGACTATCTGCTAAGGTGGTTCCTCTTACAGAAGGTTTCAAATCATTGCACTCTTAAGTGCTCAAAGCCAATT CAATCTTCACTATTATCAATGTATTAGTGAGTACCTAGAAAAATGTGTCATATATCATTGTTTCATAGTTTCTTGTAATTTAAATTAGTGAGCTGTATTT CTTTGTGGGTTTTTTCTCTCTATAATCTACTATTTATTCCTACTGAATTCAGCACCACAGTTGAGTAGTTACAATTGGTGCAGCCAAACCTAAATCTATT TCATATATGTGTTACTGTGTGCTTTAGAACAATGGTTGGTAATGAGAGGGGTACATCTCTATGTGCATGCAGAAGAGAAGAAAATGTTGAGATTGTCATA GAAGCAAACACTATTCATTAAATTGTTATGATTAATTGAAAGATTGGATTTTTTTTTTGTCTAAA
• Tissue: pods
• Gene name: LI_gene_165499;
• Additional information: details;

Expression of Ll_transcript_437208

FPKM

• PAB: 0.2
• PNAB: 9.2
• PS1: 4.5
• PS2: 3.3
• PS3: 5.1
• PW1: 6.5
• PW2: 4.9
• PW3: 2.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_437208

• Blastp: tRNase Z TRZ2, chloroplastic from Arabidopsis with 65.74% of identity
• Blastx: tRNase Z TRZ2, chloroplastic from Arabidopsis with 65.74% of identity
• Eggnog: Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA (By similarity)(COG1234)
• Kegg: Link to kegg annotations (AT2G04530)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019457060.1)
• Pfam: Beta-lactamase superfamily domain (PF12706.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;