Ll_transcript_436943

• Id Trinity: TRINITY_DN48983_c4_g1_i5
• Name Transcript: Ll_transcript_436943
• Sequence: CGTCATCGCCGGTAGCATTGTCCAAATCGTCAAACTCCTTTAATTCCACTATTTAATATTTCACCATTTTCTTTCCATTTTTCACTCTCTCTCTCTCTCT CTCTCTCTCTAGGCGCAAAAATCATGACCAGTTCCTCTGCTTCCTCTCGCAAGAATCTGAGCAAGATTGCATGCAATAGGCTTCAGAAAGAGCTCGTTGA GTGGCAGGTTAATCCCCCAACTGGTTTCAACCACAAAGTCACCGATAATCTCCAGAGGTGGGTTATTGAAGTGACTGGTGCTCCTGGCACACTTTACACC AATGAGACCTACCAGCTTCAGGTTGATTTTCCTGAGAATTACCCAATGGAGGCTCCCCAGGTGATATTTTTGAATCCGGCTCCCATGCATCCCCATATCT ACAGCAACGGCCATATTTGCTTAGGTATGTACGGGGTTTCACGATGTTAATCTTCCATGTGTTCATTTACTGTGTTTTATGGTCTGCTCCTGTAAATTAA TGTTATGCCCCGTTTTTATGTTTGTTATTGCCCGACTTTTTATTGCATGGTTTTGGTATGTTTACATGTATGTTTGTTACAATTACATTAACTTTTATGT TATCCATTCTAGTGATTTTAGTGATGAGCTCTTCATTTCCTCTAATTTGTGTTTGATTTTACTTTGAAGTCATGGGCTGATCGCATTCATAATTACAATT ACTTGCTTATAATTCATGGGAAAGAGGATGGTTATGTGTTTGTCTACTTGTTTATGTGTCATTGGTGCCTGAGAAAATAAATTTACACCTTAAATTGGAA AGAAAAACTATATATCCTCCAAAAAAGTCATCCTAGTTATCAACTTAATTACTGAAAGAAAAATCATTATATGCATTTAAGGAATTCTATCGTTCCCTGG TCAAAGATTTGGTTGGATGTGGGATCTACTCCATGAGGAGCGGTATGGGTATAGTTCTTATCATCATGAGTGATGACCACTCTTTTTGTACAACTAGGGA TGCTTAAAGCCACTTCGCTAACTGGCGTTCCCTGCACTTATGTGATCTTGAACGCCATTACATTTTAGTCCAGTTCTTATTCTATTAAGTAGATAGGACA CAGTTGTTAAAAGTGCAATCCTGCCTATATAATAGTATGATTTTACAAGTTTGGAAGACTGGAGCAACCCCAATCCAGAACAAGCTCATTTCTGCTTTAG TTGTGCTGGGTGGAATTGACCCAGAGTTTGTACTCCAAAATGGTTTAGGCTTTCTAAATATTTTATATGAATGTTTGACTTAGATATTTACATGGTTTGG TCAATCAAATGTTTTTTCCTTTTCCTCTGTAAATTTCTGTCTGGAATTTATTCTTCTTTTATGTTATAATGATATGCATTTGAAGTAAGGTAACCATGGA GAGTGAGAATAGTGGTAGTTAGAGATGCATTGCTATTTCCTTCATTCATGCCCGTGTAGAAATAGATGGTAATTTTCTCTCTATCACTCCCTTGGGGGGT TAAGGAATTAAGAATAATCAACTTTTGTTTACAAACTGCTTGATATTGTCAGTATGTGAAGTGTATGAAAGTTTGATGTTTGAAGAGATTTACTTGACAT GATAGATAAAATATTCTTATTCTCATCTGCACCCTTGATTTTAAAGTAGGAGCACCAGTTCTGAAGTCCAATCAGTTTTAGTGTATCGTACTTTATAGGT GGTCAATAATTTAAAAAGGAAAAAGAAAGTATGATTGACTTGGTGCTGGTTTTTGCTGGTGAACTGACATTAATATGCTTTGGATGATGCAGACATATTG TATGATTCATGGTCCCCAGCCATGACTGTTAGTTCTATATGCATCAGTATCCTCTCAATGCTTTCAAGTTCAACTGTAAAGGTGCGAATTTAGTTACTGA AAATGTTTTAATTTCCTCATATTTTAAGGTCTCAAACATGCTTCTTATATTGGCCATATAAGTTTTCTGTTTAACCATGGTTTGAATATCTGATAAATGA TGGAAGCCATCCATATTGATGATTATGTAAGATTCTATATGTGAACTTGTTATCACTTTGAATTAACAACTTCTAACTTGATTTCTTTTGCAGCAACGCC CTGAGGATAATGATCGCTATGTGAGGAACTGCAGAAATGGCAGATCTCCGAAGGAGACAAGGTGGTGGTTCCATGACGATAAAGTATAACAACTACTTTC TCGAACAAGTGAACAAAATTAGAGTAGAGAATTATGTTTTTGAAAGAAAATGGAAGGAGACGTGGGGAAAAGCTTTTTCGGAAACCTGAATCCCTTTAAA TTTATGCATAAAACTCTCCTGTAAATTGGCATTACCTGGTATTTGTAAAGGAAGACAAAACTGTGTCTAGAAGGATCTCAAAAGAGTAATCAAACTCAGA ATACTGTGGTTATCTCAGGTATTTAGGTGTGGATATTATGGATACGTTTATCATCCCTCACATTTGATACCACGGTTTGGTTAATGCTTTTCTTTCTTGA GAATTATGTTCTAAATATCCTCGAATTTGCAATATCAACTTATCGAGTCTCAAGATTTTAACTGTTTCTGCC
• Tissue: pods
• Gene name: LI_gene_165575;
• Additional information: details;

Expression of Ll_transcript_436943

FPKM

• PAB: 0.1
• PNAB: 0.1
• PS1: 0.9
• PS2: 0.5
• PS3: 0.7
• PW1: 1
• PW2: 1.1
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_436943

• Blastp: Probable ubiquitin-conjugating enzyme E2 16 from Arabidopsis with 83.33% of identity
• Blastx: Probable ubiquitin-conjugating enzyme E2 16 from Arabidopsis with 83.33% of identity
• Eggnog: ubiquitin-conjugating enzyme(COG5078)
• Kegg: Link to kegg annotations (AT1G75440)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019422424.1)
• Pfam: Ubiquitin-conjugating enzyme (PF00179.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;