Id Trinity | TRINITY_DN48983_c4_g1_i7 |
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Name Transcript | Ll_transcript_436945 |
Sequence | GTTCCTCTGCTTCCTCTCGCAAGGTTTTCCCTCTAACTCCATCTCTTTTCATCTCTCTCACAATTTCACACCCCTCAATTTCTCACTTGTTTTTATTGTT GAATTTCGATCGTCGTGGGTTCAGAATCTGAGCAAGATTGCATGCAATAGGCTTCAGAAAGAGCTTGTTGAGTGGCAGGTAAATCCCCCAACTGGTTTCA ACCATAAAGTCACTGATAATCTCCAAAGGTGGGTTATTGAAGTGAGTGGTGCTCCTGGTACACTTTACACCAATGAGACCTACCAGCTTCAAGTTGACTT TCCTGAGAACTACCCAATGGAAGCTCCTCAGGTAATATTCTTGAATCCTGCTCCCATGCATCCTCATATCTACAGTAATGGCCATATTTGTTTAGGTATG TCTGTGTTGGTTTCATCATGTTGCTAATCTTCAATATGTTTTCATTTACACTGTTTTCTGGTCTAAGTCTAACCATGTAGTTAATGTTGTGCCTGATTTT TATCTGTGTTCTTCTATAGCTTTTTATTGCGGGGTTTTGGCTTGTGTTACATACTTACATGTGTGTTTGTTTACATATCAGGATTTGTTTGGAAACTCAA TTGAAAATAGATTTTATTGTAGAAGTTAATAAACCTCAGAAAATATGTGGAAAACAAAAGAATATTGTAGCGCCTTGTTACATGTGCAAATGTATGTCTT CCTGATTTGATTTGTCCAAGATTCTAATTCCGATGTTATCTCAATACAAGTTTGAATAGCTAGGAATATGATTTAATGACCATAAGGATAACTTGGCAGA ATATGGGAAAACTATGTTATACTGTATGTGAGAAATAGTAAGGATTGTGGTGCTTTGTCGATATCTGACATCGATGCCTGTATGGAAAACGTCCAATTTC TGTTTTTGGTGATCATTATGAAAATTTCTTAATTAGTTTTCATGCTGGACTGCGTCGTACAATTTTCAGAATTTGGTATCTCCTTGTCCATGACGTGTTG CCCATTCGTGTCAATGTTTGTGCTTCATAGCTGTTGTGTTTCTGTG BLAST |
Tissue | pods |
Gene name | LI_gene_165575; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_436945
Blastp | Probable ubiquitin-conjugating enzyme E2 16 from Arabidopsis with 75.93% of identity |
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Blastx | Probable ubiquitin-conjugating enzyme E2 16 from Arabidopsis with 83.87% of identity |
Eggnog | ubiquitin-conjugating enzyme(COG5078) |
Kegg | Link to kegg annotations (AT1G75440) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019422424.1) |
Pfam | Ubiquitin-conjugating enzyme (PF00179.25) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |