Ll_transcript_435716

• Id Trinity: TRINITY_DN48986_c2_g1_i13
• Name Transcript: Ll_transcript_435716
• Sequence: GTTGGATTGAATTGTTTTTTTTTCGCGTCTAAAAAACAGTGCGTGTTGTGTTAGTATCTGGCAACGGGGAAGGAGTGAGGTGGCAGAGAGAGAGAGATCG GAGCGTGTTCTTTCGATCCATTCTGTTACCATTCATCAACTCATTCCTCTCACTCTACTCACGCAAACCCTAATTCTTATTTATTTCTTAATTCCTAATT TATTTATCCAAGTTTTCCTTTCTACACTGAACATCATCATTCTCTCCCGTTTTTTATTCTCTTTAGAACAAAAAAAGTAGAAACCTAACTGCCAATGTTT ATCACACCTGATTCTTCCTCTAACCACCACTCTCCGACCATTGCTCCTCCTTTGCAGGCGGTGTCTGTGGACTCCAACAGCCGTAGCCTCCCTCCAAGAA CCCTCCCTTCTCCCTGGGCTCAGGTTGTCCGCGGCAGCGACGCCGAATCATCGACTCCCGTCACGCAGTCGCCGCCGACGTCATCACCGCCTTCTTCCTC CTCCGCTCTCGCTCCGGATCAGGCAATGTCATCTGATTCCGTTGAGAACTCTAATTCTAACACTGTTGCTGGTGGGAGTAGCGCTTTCTCTGACGCTAAT GATGGAAATGGCGGTCGTTCTAAGAAACCTGCTTGGAAAAAACCCGTAAACGACGTCGTTTTGGAGGCTGGTCCTGTAATGGGTGCGGAATCGTGGCCTG CTTTATCCGAATCTACCAAAGTGTCTGGTAAATTACAACCTGAATCCTCGTCATCGAAGACTGCTGCTGAAGGATCATCACTCTCCTCTTCTCAGGCCCC AATGACTTCACACTCTTCTCAGAAACAGGCTACTAGTAATGCAAAACTTAATTCCTCGACGAATTATAATATGCCAAACAGACAAAGATCAATGAAGAGG GGAGGTGGAAGCAACATTAGGTTTGGTCCTGCACAGAGCAGCTTCTCCAATCCTCCCCCACCACCACCACTGCCACCACCCTTTCCGGTATATCAACTCC ATCCAAGTAGCTATGGCATTCCAGACAATTCTCCAAGAGATCATTACCAGAACAATAACTGGGATACAAGACCACCGACTGGTGGTTTCGTGCCCGCGAT AAATGGACACCGGGGTTCTTCTCACAGGGGTAACTTTGGGCCCCGTCCACGTGGAGATGGTTCCTATCATAATAATTATGGCAGCCGGCGTGACAAGGAT CATGGAAATTATGCTAATAGAAGAGATGCTCATGTACAGCAACCAAGGATGCCTCCTCCAAGGGGATTATTGAGCTACCCATTACCAAATACTGCTGGAT TTGTTGGCCCCCAGCCCATCGGAGGACCCTTTCCCAACCCTGCTGGCTTCCCCAAGTTCTGTTACTTTCCAACTCAACCATTTGATCACTTCAAGGGCAT GCCGTTCATTACCCATGGTCCTCCTCCTGCATTGTTCTTCCCTGCTGCAGAATCTCCTCTGACCATAGTCAACCAAATTGATTATTATTTTAGTGAGGAT AATTTAGTGAAAGATGAGTTTTTAAGGTCCAACATGGATGAACAGGGTTGGGTTCCCGTTACTACCATAGCAGACTTCCCTCGAGTTAGAAGTTTGACGA ACAACATTCAGGTGATACTGGACTCAATGAGAGCTTCCACTGTTGTGGAAGTACAAGGTGACAAGTTAAGGAGACATAATGAGTGGGAGAAATGGGTGCC CTCTTCCAAGCTTCAGGCTGATTCTGGTTCAATATCTCCTGGTGGATCAAGACACGATAACCTAGCCGCTGATTTTCAAACTATAGCCCTGGAAAACGCA ACTATCGAGGAAGGTCCAGCAGAGTCTTCCAATCAGTCTCAACTCCCAAATGGTGATGCTGCAAGAAACAGCAATTGAAACTATACTTACATAATCTACC CCACCCGAAATTTCTGGGCCTTGTCTTCTGTCCAGTATTCAGCCGGTCCCTGGATTCTAATTTTGTGTGTGTGCGGAAGGTGATGGAAATAGAGGCGGTG TGGGAAGTTGATTATTTCTACAGTCATAGCTCGATTTTGATAGTAATTTTGAGTAAGTAGTAGAAACAAATAAGAATTTTGAGGCTGTGTGGCTTATAAT GCTTTAAATGTTTCTGCCGTGATTCCTCCAAATGTTATTCTTTTTCATCACACTTGGGAATGGAAGGGGCCACAAAGGATCAAGATTTTCACGTCAAAAC TTTCATCTGGTTGTTGGTGTGGTTGCAATCATGATTTTCATGACTCCCTAAACATTGATGTTACGAACTATTGAAGGGGCCACAAGGGTTGTGGTTTCCA TAACTCTCAACTTTTACATTTTGGTGTTTGTAGCTATGGTTTTTCTATTTACATTACATTTTGGTGTTTGTGGGTTCGATAACTCTTAAAACTTTTACAT TTTGGTGTTTGTAGCGATCGTAGGTTGGAATGAAAACCGTAATCCTCTCTAAAAAAA
• Tissue: pods
• Gene name: LI_gene_165590;
• Additional information: details;

Expression of Ll_transcript_435716

FPKM

• PAB: 4.1
• PNAB: 9.4
• PS1: 14.7
• PS2: 9.1
• PS3: 11.1
• PW1: 8.3
• PW2: 9.4
• PW3: 6.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_435716

• Blastp: La-related protein 1C from Arabidopsis with 31.02% of identity
• Blastx: La-related protein 1C from Arabidopsis with 29.57% of identity
• Eggnog: La ribonucleoprotein domain family member(COG5193)
• Kegg: Link to kegg annotations (AT4G35890)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449481.1)
• Pfam: La domain (PF05383.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;