Ll_transcript_435694

• Id Trinity: TRINITY_DN48986_c2_g1_i3
• Name Transcript: Ll_transcript_435694
• Sequence: AAAATTTGTACTTTATCAACAATTTTGCTGGATAACTTTACTTATCATTTAGCGTGCACATAACAAACAAAAGTTGCTTCTAACTAATTTTGAGTCAATC TTTAATTATATTATTTGGTCATTGGGAGGAGTTATGAAATTTCTTATGCATTATTAGTCCATTATCTAGAAGACTTTGAAATTGCTTCTAACTAATTTCA AGTCAATCTTTAATCTTATTATTTAGTTATCAAAATGAGTTGAAATTTTAATCAAATATCACATAATATCTTGAAATATTAATTAATGTTAAATCTAATG ACAACACAATAGGGTTTTGTTGGATTGTTCTTTGTATCAGAAAGTGCGTTTTTTGTTAGTAGCTGGAAACGGGAGAGGAAGATAGGTGGCAGAAACAGAG ATCGCAGTGTTCTTTCCCATAACAATTAAAAGAAAACCCTAACTGCCAATGGTTACCGCACCTGATTCTTCCTCTAACCACCACTCTCCGACCGGTGCTC CTCCGTTGCCGGCGGTGTCTGGGGACTCCAACAGCCCAAAGTTCCCTCCAAAAACCCTCGCTTCTCCCTGGGCTCAAGTTGTCCGCGGCGGCGACGGGGA ATCGACGGCTCCTGTTCCGCAATCGCCTCCGCTGCCTCCTCCGACGTCATCATCGTCTTCGTCCTCCTCCTCCATCGCTCCGGATCAGCTGAATTCATCA GATTCCGTTGAGAATTCTAATTCTAACGCTGTTGCTGCTGACGGTGATGGTAATGAAGGCAATGTGGGTAGTTATAAGAAATCGGCTTGGAAGAAACCCT CGAACGGTGTCGTTTTCGAGGCTGGTCTTGTAATGGGTGATGAATCGTGGCCTGCGTTATCTGAATCCACCAAAGTTTCTGGTAAATTGCAACCTGATTC CGCTTCTTTGAAGGTGGCTGTTGAAGGATCATCACTCTCCTCTCCTCAGGCCCCTGTAATTTCACACTCTCCTCAGAAACAGGCTTCTAGTAATGCAAAA CCTAATTCTGCGACCAACTATAATATGTCAAACAGACAAAAATCAATGAAGCGAGGAGGTGACAGCAACATTGGGTCTGGTCCTGCACTGAGCAGCCTCT CCAACCCTTCCCCACCACCACTGTCGCCCCCCTTTCCGCTATATCAAGTCAATCCGGGTGGCTATGGCATTCCAGACCATTCTCCGAGGGATCATTACCG GAACAATAATTGGGATACAAGACCACCGGCTAGTGGTTTCGTGCCTACGATGAATGAACATCAGGGTGCTTCTCGCAGGGGTAACTTTGGGCCCCATCCA CGTGGAGATGGTTCCTATCATAATAATTATGGAAGCCGGCGTGATCAGGGTCGTGGTAATTATGCTAATGCTAGAGATGCTCATGTACACCAACCAAGGA TGCCTCCTCCAAGGGGAATATTGAGGCACCCACCCCCTAATACAGCTGGTTTTGTTGGCCCCCAGCCCATCGGAGGACCCTATTCCAACCCTTTCGGCTT CCCTGAGTACCATTACTTCCCAACTCCATTATTTGATCACTTTAAGGGCATGCCGTTCTTTACCCATGGCCCTCCTTCTGCAATGTTCTTCCCTGCTGAA GAATCTCCTCCGACCAATGTGATAGTCAACCAAATTGATTATTACTTTAGTGAAGCTAATTTAGTGAAAGATGATTTTTTAAAAGCTAACATGGATGAAC AGGGTTGGGTTCCAGTTACTTTGATAGCAGACTTCCCTCGAGTTAAAAGTTTGACAGACAACATTCAGGTGATACTGGATTCAATGAGAACTTCCACTGT TGTGGAAGTACAGGGTGACAAGTTAAGGAAGCATACTGAGTGGAAGAAATGGGTGCCCTCTGCCAAGCTTCAAGCTGAGTCTGGTTCAATATCTCCTGGT GGATCAAGAAGCAATAATCTAGCACTTGATCTTCAAACCATGGCCCTGAATGAACCAACAACTAAGGAGGAAGGGCCAGCAGAGGCTTCAGATCAATCTT AATTCACAAATGGTGATGCTGCAAGGAACAGCAACTAAAACCTCTGCTTACATAATCTATACCCCACCCTATGTTTCTGGGCCTTGTACACTGTGTCCAG TATTCAGCCATATGACCTAAGATTTTAATTTATTTTTTTGGTGGTGATGGAAATAGAGGCTGTGTGGAAGTTGATTATTTCTACAATTACAGCACGATTT TGATAGTAATTTTGAATCAAGTAGTGGAAATAAATAAGAATTATTCAGTTTTTAAGGTCTAAAGATAAGGAGAGAAATTACTGAGACAGGGAGACGAAAA AAAAGCAGAAATTTGATTGACGTGGATTTAATGAAGTTATGGATTTGTATATAAGTATGCTCTGGATTCTCATATGTTTGCTTGTGGGTAAATGTTTCGT ATTCAGGTTGCTTTTTGTGTGTTTGGCACTCTTCTGGAAATCTTGTGTAAAATATCTTTTACCATCATAAGTTATTACTCATGATTTGTAAGGGGCCGAA TCCGAAGAAAAGAAAACAGATGAATGGGATACCGGTAGGGGTGGCAATATGGGTCAGCCCGTCCTGACCTGTCCTGTCTTTGGCCCGTCAAAATATGGGT TGGCCTAACTCTTATTACTAAAGGGCTCATAATGTAAGCTCATACCATATTTGGC
• Tissue: pods
• Gene name: LI_gene_165590;
• Additional information: details;

Expression of Ll_transcript_435694

FPKM

• PAB: 16.5
• PNAB: 10.3
• PS1: 11.6
• PS2: 9.8
• PS3: 10.3
• PW1: 11.2
• PW2: 11.8
• PW3: 9.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_435694

• Blastp: La-related protein 1C from Arabidopsis with 30.8% of identity
• Blastx: La-related protein 1C from Arabidopsis with 28.99% of identity
• Eggnog: La ribonucleoprotein domain family member(COG5193)
• Kegg: Link to kegg annotations (AT4G35890)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019453261.1)
• Pfam: La domain (PF05383.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;