| Id Trinity | TRINITY_DN48986_c2_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_435698 |
| Sequence | GTTGAATAGTTTGTTGGGGTCACAGTGAGTTTTGTGTTATAAGTCGGAAACGGAGGAAGAGAGGTGGCGTAGATAGATATCGTAGTGTCCTTTCAATTCA TTCAGTTCATTCATCTACTGCGCGTGACAGTCATCGTACCCCACAAACCCTAATTCTTATTTATTTATTTATTTATTTATAGTTTTATGATTTATTTTTA TCTATCTATGTTTTCCTTTCTCCACTGATCATTAATCTTGAGTTTTCATTCTGAATTCTGATCAGAACAATAACAAAAAACTACAAACCTAACTACCAAT GGTTAACACACCTGAATCTTCCTCTAATCACCGTTCTCCGACCAGTGCTCCTCCATTGCCGGCGGCGTCTGGGGACTCCATCAGCCCTAAGCTCCCTCCG CAAACCCTCCCTTCTCCCTGGGCTCAGGTCGTCCGCGGCGGCGACACGGAATCAACCAGTGCTGTCAAAAAATCACCGTCTCTGCCGCCGCCGACTTTAT CGCCGTCTTCCTCCTCCTCCGCTCTCCCTCCGGATCAGGCGATTTTATCTGATTCTGTTGAGAAGACTAATTCTAACACTGTTGCTGCTGCTGATAGCTC TTCTTTTGATGCTAATGATGACAATGCTGGTCGTTCCAAGAAACCTGCTTGGAGAAAACCTTCGAACGGCGTCGTTTCTGAGGGTGGTGCTGTAATGGGT GCTGATTCGTGGCCAGCTTTATCTGAATCCACCAAAGTTTCTGGTAAATTACAACCCGAATCGTCGTCGTCCAAAGCTGCTGCTGAAGGATCATCACTCT CCTCTTCCCAGGCCCCTCTAACTTCACACTCCCCTCAGAAACAGGATAATAGTAATGCAAAACCTAATTCTGCATTGAACTATAATATGCCAAACAAACA AAGATTGATGAAACGGGGAGGTGGCAACAACATTGGGTCTGGTCCTGCACAGAGCAGCTACTCCAACCATCCCCCACCCCCACCCCCGCCACCCTTTCCG GTATATCAGCTCCATCCAGGTGGCTATGGCATTCCAGACCATTCTCCAAGAGATCATTACTGGAACAATAGCTGGGGTACAAGACCACCAGCTAGTGGCT TTGCGCCTGCGATGAATGATAATCGGGGTTCTTCTCGCCGGGGTAACTTTGGGCCCCACCCACGCAGAGATGGTTCCTATCATAATAATTATGGCAGCCG GCGTGATCGGGATCGTGGGAATTATGCTAATAGTGGAGATGCTCATGTACACCAACCACGGATGCCTCCTCCAAGGGGACTACTGAGGCACCCACCACCT AATACTGCTGGATTTATTGGCCCCCAGGCCATCAGAGGACCGTTTACCAACCATGGTGGTTTCCCAGAGTTATGTTACATTCCAACTCCATTATTCGATT ACTTCAAGGGCATGCCGTTCTATACCCACGGTCCTCCTTCGCCATTATTCTTCCCTGCTGCTGAATCTCCTCCGACCAATACGATAGTCAACCAAATTGA TTATTACTTTAGTGATGCTAATTTAGTGAAAGATGACTTTTTAAAGTCAAAAATGGATGAACAGGGTTGGGTTCCAGTTGCTTTGATAGCAAACTTCCCT CGAGTTAGACGTTTAACAAACAGCATTCAAGTGATACTGGACTCAATGAGAGCTTCCACTCTTGTGGAAGTGCAGGGTGACAAGTTAAGGAGGCGTAATG AGTGGAAGACATGGGTGCCCTCTGCAAAGTTTCAGGCTGATTCTGGTTCAATATCTCCTGATGGATCAAGACACAATAACCTAGCAGCTGATTTTCAGAC CAAGGCCCTGGAAAATGCAACTAAGGAGGAAGGTCCAATGGAATCTAACAATCATTCTCAACTCCCAAATGGTGATGCTGCAGGGAACAACAATTATTAG AACTCTACTTACATGATGAACCCCACCCGAAAGTTCTGGGTCTTGTCTAGTGTCCAGTATTCAGCCCTGTGGCCCAGGATTTTCAATTTTATATTTTTTA GAGGTGATGGAAACAGAGGCTGTGTGGAAGTTTGATTATTTCTACGGTCATAGCTGGATTTTGATAATGATTTTGAGTTAAGTAGTGGAAACAAATAAAA GTTATTCAGTTTTAAGGTCTAACCGAGACATAAAAGTGCACCTCAGAATTTTGATTTAAGTAAATTTAATGAGGTTATTAATTTGTATATGTATTTGCTG GGGTTTGTTTATTTTTTTTTCTTTGTTTCATAACCTCTTACAACACCTTGTTCTGGGGGGAGCAGATGATTTGTTGTCCCACACATGTCTGACATTTCAC T BLAST |
| Tissue | pods |
| Gene name | LI_gene_165590; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_435698
| Blastp | La-related protein 1C from Arabidopsis with 31.1% of identity |
|---|---|
| Blastx | La-related protein 1C from Arabidopsis with 28.39% of identity |
| Eggnog | La ribonucleoprotein domain family member(COG5193) |
| Kegg | Link to kegg annotations (AT4G35890) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019436784.1) |
| Pfam | La domain (PF05383.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |