Ll_transcript_435688

• Id Trinity: TRINITY_DN48986_c2_g2_i1
• Name Transcript: Ll_transcript_435688
• Sequence: CCATCTCAGTGATGTTCGGAAGGACACTTGAGGTTCCTGAAAGTTGTGAAGGAGTTGCACGCTTCACATTTGAGTATCTCTGTGGTCGCCCGGTATGTTA CTTTTTTTGGTTGTTGTTCCGAGTAATTTCTTTTTCAAAGCTGATAGCCATTAAAACTTATTGTTTTTCCGTTCTTTTTTCTTATGTACTGGCAAGTTGA TATTATGTGTTTCATAAAATTGCTTGACACTCAGATAGATGATAACAACTTCCAAGAGTTAGTTCGGAGACACGATGAAACATTTAGTATATTTACTCGA GAGAAATTCTATAGCATTTCAAACACTCAGATATATTTACTTCCAAGAGTTTTATATTTACACGATGAAACATTTAGTACATCTAGTATATTTACTCGAG AGAAATTCTATAACATTTAGTACATTTAGTATATTTACTTGAAACTCTGAAGCATTTCGAATTCCTCGAGAGAAATTCTTTCATCCCTCATTGAATATAT TGAAAATTTTACAAAATCAGGTCTAATATTCTCGGGATTTCCTAAATTGTAGCGATAACATATTTACAGAATGCATCACTCACTCTAGTTACAGCGTACA TCAAAGGATATTTATAGAAATCAATATCCAATACTCGTCCTCAAGTTGGTGCATGCATGTTGTATATGAAGCTTTTACATATGTAAGTTACTGTAGGAGC ATGGATAGATTTGAAGATATCAACTAGTAGTTCATTGGAGCTTCCAAATGAGGTAGTGATTTCTCCAAAGAAGATATTTCTCAGATAAAAATGTCAATAA ATCTCCAAAGCAAATGATTTGAATAGATAGAGTGCAAGCTAGACCAAGTTTCCCGGTTGAATCTATTAGATCCTTGTAGTATTGTAGACTCGATAAGATA AGATGATTTTGTGGTTGTGCTCACTTGTCGCCGTCCACATAATCGATAACCTTTCAACTCTAGAATGTTTTCAATACCTCGAATGAGGTATGTAACACCC TAGGTTCTACAAGCATGTCAGAGAGGGGCATGCGGAAGGAGCAACTCATAAAGCTAATGAGGCTATTGAAGCTTGAACATGTGTGACATGTAAAACATGA CATTCCAATTGTTCTACTTAAATTGCTTCTAAATCATTTTGATTTTAACTTTTCTTTTGTGTTACTTCACATGCAAGCAGATATATATGTTAAATTGGTA ACTATCTTTCTCTCCCTCTCTCTAATTGTTTTGGTTATTTTCAGTTGGGTGCAGCAGATTATATTGCAGTAGCTGAAAACTATCACACTGTTTTCATATC TGATATTCCAATGATGAGTATGCGCATCCGTGATAAGGCACGCAGGTTTATCACCCTTATTGATGAGTTATACAATCGTCATTGCTGCCTATGTTGCTTG GCATCCTCTTCAGTTGATGAATTATTTCAAGGAACTGAGGAGGGCACACTTTTTGACTTGGAGAGTTTCCAGTTCGAAACAGAGACCGAAGGTGCGAAAC TTCGCCGCGATGTCTTAGCAGAAGGCAATGTAGGCTCAGGAGGTGGCCCTGTTGGCATCACATCCATTCTATCTGGTCAAGAAGAGATGTTCGCTTTTCA AAGAGCTGTTTCACGCCTGATTGAAATGCAAACACCATTATACTTGGATGGAATCAGTAATTTCCACCCTTTTTTTTCAGAGGCAACATTACAAATTATT ATCAGAATCATCAATCTGAAAGTAAAGTTTTTTATTCTTCTTGGAGTGAAGTTGTTTTCTGATACATTTGTTTATAGAAATATAGTGACAATATTGATTC TTTATACCTTACAGCTATATCCTAAATAAATGCCTAAGAAATTTGTATTTTTGGAAGTTCTAAATGTAAAATATAAGTCTCAAAGGGTATTTAATATTGC AGGTTTTAGTAGATTGTGAATTTGTAACTATGCAACTTCACCCTTTAGTTAACATGTTAAGAATGGAAGCATTCATGAGAAAGTTAGGGTAGCTCTTACG GTAGAAAAGATGATAAACTTGTGTCTTAGTTGGTTGTTTTGTTAAAGAACATGATTTATAATAGAACATTATTGCATCTTTCGGTTCA
• Tissue: pods
• Gene name: LI_gene_165591;
• Additional information: details;

Expression of Ll_transcript_435688

FPKM

• PAB: 2.1
• PNAB: 1.1
• PS1: 0.3
• PS2: 0
• PS3: 0.4
• PW1: 0.1
• PW2: 0.4
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_435688

• Blastp: AFG1-like ATPase from Mus with 36.36% of identity
• Blastx: AFG1-like ATPase from Mus with 38.06% of identity
• Eggnog: AFG1 family ATPase(COG1485)
• Kegg: Link to kegg annotations (215951)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019447543.1)
• Pfam: AFG1-like ATPase (PF03969.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;