Ll_transcript_435705

• Id Trinity: TRINITY_DN48986_c2_g7_i1
• Name Transcript: Ll_transcript_435705
• Sequence: CAACTTGCTGAGTCTCCTCTCCCTCGCTCTATAGCCAATGGCAATTTCCTCCCTCTGCCTAAAATACTCTTAAACGACATCACTTGACTCATAGGCGATC GAAACGACGACGAAGTTGTTGTGTCATAATTAGTCTCTGCCCCCAAATTCACAAACGACGAAGAAGAACAAATTCCTACTCCGGTTCGGTTCATTTCAGA ACTCGAACCCGGTTCAGAAACATTAACAACTACTTCCGATTGAGTAGGTGCCTCCACGTGGACCCTACAAAGAGGGCAAGTAGAATGAGATTGGAACCAC ATATCAATACACTTAGTATGAAAACTGTGTTTACATTTGGGCAAAACCCGACCCGCTTCACCGTCTTTGAATTCCGATAAACAAACCGCGCATTCAACCG GTTCACCTTTAGGGGAAAAGGTGAATACTGGGAGCGTGGCGATCACGGAGGCTTCGAGGCCGCGTGTGGTCGCCGTGAGCGCGGGGTCAATATAGAAGAC GAATTGAGAACGACCGTTATGGTGGTTGTGGCTGCCGCGGAGGTGGTTGCGGTGGTGCATACGGAGACGGTGCCAGCGGACGTACAAGTTGATGCAAATC ATTATGAGGATAACGATTATCATAACGGTAATGCTGATTAGCATAATTTTTCCACTACGGAAGGCATATGTGTCTTCTTTCTGATTATTGTTGGGATCAG CGTTTTCCATAACTGATTATTTAGAGGTTGAGAGAGAGATAGAAACAATAACGTTTATGTTGGAGTAGAAGGTTCAGTTAAAGTATAATGTTCATATTAA TTGCATTATTTGTCGTCTAATTTTTGCTATAATAAATGTTCATATAAACAACTTCGTATTCGACCCTGTGCACGCGGTTTTGTCAGAATGTTCTATTTGC TGTATGCTGTAAAATTAGGGTAATGTAATCTTGTATTAATGTG
• Tissue: pods
• Gene name: LI_gene_165596;
• Additional information: -

Expression of Ll_transcript_435705

FPKM

• PAB: 0.3
• PNAB: 0.1
• PS1: 0.5
• PS2: 0.1
• PS3: 0.2
• PW1: 0.8
• PW2: 0.4
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_435705

• Blastp: RING-H2 finger protein ATL2 from Arabidopsis with 40.86% of identity
• Blastx: RING-H2 finger protein ATL2 from Arabidopsis with 43.75% of identity
• Eggnog: zinc ion binding(ENOG41121N2)
• Kegg: Link to kegg annotations (AT3G16720)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_004508196.1)
• Pfam: Ring finger domain (PF13639.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;