Ll_transcript_330363

• Id Trinity: TRINITY_DN49000_c5_g1_i1
• Name Transcript: Ll_transcript_330363
• Sequence: ATGATCCTGATCCAAAATATTGACATGCATGAACTAAAGTACATTAAGCCAATTTAGTTGTCTTCTTTGTCTCTGTCTCTGATATCTCCAATTAAAGTTC TATAAATCTGATTTGGTTTCAAGTGAAAGTCACATATTATCTCTTCTATTTTATAATTCTCATCATATCACATGGCACTCCAACCAAAGAAGATCATAAT TGATACAGATCCAGGCATAGATGATGCTATGGCAATATTTCTTGCCTTAAGATCACCGGAGATAGAAGTTATTGCACTTACAACAATTTATGGCAATGTT TACACCACCTTGGCAACCAGAAATGCATTGCATCTGTTGGAGGTTGCAGGGAGAACTGATATACCAGTTGTTGAAGGATCTCATGTGACATTAACTAAAG GAACAAAACTTCGTGTTGCAGATTTTGTCCATGGTGCAGACGGACTTGGCAACCAAAATTTCCCTCCACCAAAAGGAAAGCCTCTCGAAGAATCAGCTGC TGCTTATTTAGTTCAACAAGCAAAAGAAAACCCTGGCAAAATCACGGTGGTGGCATTGGGCCCGCTTACTAATATAGCGTTGGCTGTACAACTCGATCCG GAATTTTATAAGAACATTGGACAGATTGTTATACTTGGTGGTGCTTTTGCAGTAAATGGCAATGTGAATCCAGCTGCTGAAGCTAATGTGAGTTTCTCAA TTCTGAATTGAAATCCTAACTATAGCTTCCATGAAAATATTATATCAATCACTGCTGCTTCTGCCTCACTCCTTGCCCGAGTTCGGTTCCAGATATTTGG CGATCCAGATGCTGCAGATGTTGTATTCACAAGTGGGGCAGATATACTGGCAGTAGGGATAAATGTAACTCACCAAGTTGTATTGACAGGTACCCCTTTA GCAAAGTCATTGCACTCTTGCTTCCTATACATATAACCATTTGGTATTACTTAAATGGATAAGTTTCCTTTGGTAAATCTCACAAGGTTTAGGACTTTAA ACATTGCTATTTCTTCCGCGGTTATGGTAATTTTTTGTGCTATTTCCTACATGTTATTCTCATCATTGATCAAGTAACATTTTAAAGGGATGTTTTCGAA TTTAGTTTTATGTTTAGTAAGATCTTTTGAAAAAAGGTTTCAGCTCAACTGAACTCATAGAGGTCTTCCTAACTGAACTAGTATTCTCTAAAAGACCTTC ATCGATTAATTAAAAATAATGCAATGGATTACTAAATAGTTCCATCATTTACTGTCTACCCCACCCCAAAAAATATTTGTTGAAGTAAAGATAAAACTTC GAAGCTATCTATTCCCCCTAATGAAACATGGTTTGTTTTATTATCTTTCTATCGCAATTTTCTTTTATCATGGGTGTGACGACCGATTAAATTGGGCATA TCTTGTTTTATAGCACACTTAGTTTTGTAACTATTGAGGTTAGACAGAATAGTTCATTTTGTGTGGTATTTCCATTAGTAACTCTTGGTTGATGATTTTA TTTCATCCATATAGACATAAACCAAGGGCATGGAAACATACTCATAAACAACTCTATCAACAATTAACAATTAACTTCTTCACTAACTTATTTTGATTTT CATGACAATATTTTGAAATCATGCTTTTTCTGAAACTTGCGCTGAAACTTGCTGTTATCTGTCTCATATTTGAATTTAGTATAATGAGAGCTTGACATCA GCTGAACAGTATGAGCATGCTGCTATTATGCCTCACCTAATTTATCTTCTGTCACCACTTTTCTGGTTTACTCTTATCAAAAAAAAAAAAAATAACCAGA TTCTGATCGAGAAAAGTTAGCAAGTTCGAATGGAAACTTCGCTCAGTACTTGAACAAAATCTTAGGCATTTATTTCTCCTACCATCGTGAGGCATACAAC ACCAAAGGTGTTTATCTTCATGACCCAACAGCACTTCTTGCAGCTATTGATCCTTCACTTGTAACTTGCATGGAGGGTATTGTTAGAGTCCAAACCAATG GTATTACAAGGGGAATTACAATACTTTACAACAAACAGAAAAGGTTTGAAGAAATCACTGAATGGTCCAATAAGCCCTCTGTAAAGGTTGCTGTGACAGT TGATGCTCCTAGAGTTGTTAAGTTGGTTATGGATCGTCTTATGGACTCTTGAAGTAGACATTGGAACCTCTCAAATTAGACCATTGATTCTTCTGTAACA ACTTGCATCTAGTTGCAAAGGTTTAAGCTAAAAAGTGCCCTCACTTAAATGTTGTATTTGTGTTTTCAAGTTCTTGAACGCTATTTTTTTACTGGCCATT TCATTTCAACTTCAATGTGGAGAGAAAGGACTGTTGCTTTGTTCATTGTTCTTCTTTGGTCTCCAAGTATGGCCACGCTTCACTCATTAATTGAATTCCT TTTCCAATGACAAAATATCTAGTAGCGTTCTATTATATTGTTCAGAATGGAAGAAAACAAATTGTAAAAAGAAGACTCCTGCAAAGCAGAGATTTGGAGA ACCTG
• Tissue: pods
• Gene name: LI_gene_165702;
• Additional information: details;

Expression of Ll_transcript_330363

FPKM

• PAB: 1.6
• PNAB: 0.3
• PS1: 0.6
• PS2: 1.2
• PS3: 0.1
• PW1: 0.3
• PW2: 1.7
• PW3: 2.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_330363

• Blastp: Probable uridine nucleosidase 2 from Arabidopsis with 81.55% of identity
• Blastx: Probable uridine nucleosidase 2 from Arabidopsis with 69.66% of identity
• Eggnog: nucleoside hydrolase(COG1957)
• Kegg: Link to kegg annotations (AT1G05620)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019420711.1)
• Pfam: Inosine-uridine preferring nucleoside hydrolase (PF01156.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;