| Id Trinity | TRINITY_DN49000_c7_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_330394 |
| Sequence | GAAAACTACAACTGAGCAATAATTCCTTCTTCGTATTACAGGCGATAAGGTAGATATTTGTTTTCTCATATTTTCACATATAGCCGATTCCGTATTCCGA GTCAACTCAAAAACCTCTCTAGAAACCCAACCTAACACAACACAAGTACTTGAACTAGTTTCGTTCAACACTCTTATCTCTCAAACCTTATACCTCCACC CATGTCTATTCTTTCAACCCCAATTACTCTCACAACCAATACCTTACTCCTTCATTCTCAATCCCAACAAACCAAAACCCAAACCGTTGTTTTTACCAGA AGAACAAGAACTTCAACCATTACAGCATGTTCCGCTTCAGAGAACCCGCAACAGAAGCAGAAATCGGAGAACAAGGCCAAGAACAATAAGAACATTTCTG ATGAAGAAACGGGTATTAACCCAGTTGGGTTTCTTGTCAAGCGTGGCATTACCCATAAAGTATTTGGCCAGTTCCTGCGTGAAAGGCATAAAGCATTGAA GGATCTGGAAGATGAAATTTTCAATCGGCACGTCAACCTTAAGGATATGTCTACTGGATATGAGTTATTGGGTATGCATCGTCATCCAGAACACCGGGCA GATTATATGGAATGGGCTCCAGGGGCTCGCTACTGTGCAATTATTGGTGACTTCAATGGGTGGTCACCTACCGAAAATTGTGCCAGAGAGGGTCGCTTTG GTCATGATGATTATGGATACTGGTTTATCATTCTTCAAGACAAGCTGAGAGAGGGAGAGAAGCCAGATGAACTCTATTTTCAACGGTACAACTACTTAGA TGATTATGATAAAGGGGACAGTGGTGTCACCATTGAAGAGCTATTTAAGAAATCAAATGATGAGTACTGGCTACCGGGAGAAGATCGTTATCTAAACAAC CGTTTTGAAGGACCAGCAAAGTTATATGAGGAGATATTTGGTCCTAATGGACCACAAACTTTGGAGGACTTGCCAGACTTACCAGATGCAGAATCAAGAT ATAAAGAATGGGCCGCAGAACATGGACCTTCCCGTTATGCTGTGATTGATAATGATGACAAGAAGTTTGACATATTTAATTTTGTAGTTGATCCCGAATG GCGAGAGAGAATTCGTAAACTGAAACCTCCTTTAGCATACTGGAATGAGTCACGTAAAGGTAGGAAGGCATGGTTGAAAAAGTATATTCCTACCATTCCT CATGGCAGCAAGTACAGGGTCTACTTTAACACTCCTAACGGGCCATTGGAACGAGTACCTGCTTGGGCTACATATGTGCAGCCAGAAACAGATGGAATGC AAGCTTATGCGATCCACTGGGATCCACCACCTGAGCATGCATACAAACGGAAACATGCAAGCCCTAAAGTACCAAATTCCCTGCGTATATACGAAGCTCA TGTTGGAATTAGTGGATCTGAGCCAAAAATATCCTCATTCAATGATTTCACTGACAAGGTTCTTCCTCACATAAAGGTAGCTGGATACAATGCAATCCAG TTGATCGGAGTTGTCGAACACAAGGATTATTTCACTGTTGGGTATAGAGTTACCAATTTTTACGCAGTTAGTAGTCGATATGGCACTCCTGATGACTTCA AGCGATTAGTTGATGAGGCACATGGACTTGGACTGCTGGTCTTCTTAGAAATTGTCCATTCATATGCAGCTGCAGATGAGATGGTTGGATTATCGATGTT TGATGGATCAAATGACTGTTATTTTCATTCTGGTAAACGAGGGCATCACAAATTCTGGGGCACCAGAATGTTCAAATATGGCGACCTTGATGTTCTGCAT TTCCTTCTCTCAAACTTGAACTGGTGGGTTGAGGAGTATCAGATTGATGGGTTTAGGTTCCATTCTGTTTCATCTATGATATACAGTCACAATGGTTTTG CTACTTTTACTGGTGACTTGGAGGAGTACTGCAACCAATATGTCGACAAGGATGCACTGTTATATCTTATCTTAGCCAATGAGATACTACATTTTTTTTA CCCAAATATTATCACAATAGCAGAAGATGCAACATTTTATCCTGGATTATGTGAGCCAGTTTCTCAAGGTGGATTGGGCTTTGATTATTATGTCAACCTT TCTGTGTCTGAGATGTGGTCAACTTTTCTTGAGAGTGTTCCTGATAACGAATGGAGTATGACTAAGGTTGTACTGAATTCTGATTTATCATTGCATTAAT AAAGATGATGATCTGGTTGATTCCGTTAGTCTTTTATGCAACCTTTTTTCGTAGTACTATAATATCGTTATTGTTGCTGTGCTTCTCATGCTGCAGATTG TTAACACATTAGTTTCAAATAGAGAATATGCTGATAAGATGCTTACATATGCTGAAAATTATAACCAGTCCATATCTAGAAGGCGGTCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_165708; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_330394
| Blastp | 1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic from Arabidopsis with 70.56% of identity |
|---|---|
| Blastx | 1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic from Arabidopsis with 73.03% of identity |
| Eggnog | Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position (By similarity)(COG0296) |
| Kegg | Link to kegg annotations (AT3G20440) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019440691.1) |
| Pfam | Carbohydrate-binding module 48 (Isoamylase N-terminal domain) (PF02922.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |