| Id Trinity | TRINITY_DN49000_c7_g1_i13 |
|---|---|
| Name Transcript | Ll_transcript_330397 |
| Sequence | CACGAAACGTCTTAAAGAGAGCGACCTGGTCGTGACTCAGCCAGTAATGATTATCTCGTGTCATTTATAATTGTTGCAAGCTACTCTATCTATGGTGATT ATACCAATAATTTCTTTTCCCATCAACAATCATTCTGATAATGATTACACTAGTAGTTTCTCTTCCTACCAATGATCATTGTGTTGGTGTCGTTTCTTCC ATTGATGAATTATATTAGCAGTGACTTCTTTTCCTATCTACGATCATTCCGATGATCATTATACCAATTGTTTCTTTTCTCATTGATGATCATTCTGATG TGATAATTATACAAGTGATTTTTCTTCCCACCGATAATCATTCTAGTGTTGCTTTTTCTCCGATTGACAAATTATATTAAAACTGACCTTTTTCTCCACT GACGATCATTCTGTTGGTGATTATACTAGTGATTTCTTTTCCCATCGACAAAAAATCCGATGTTGGTTATACCAGTGGGTTTTCTTCCTATCAACAATCA TTTCGGTGGTTCCATTTTTCCATTGGTGAATCATATTAGTAGTGAATTCTTTTCCCATTGACAATCATTCTGATGATGACGCATGCATGTTCTTTGCTTG TGTACAAGGTGGTTTAGCTTGAATATAACTTTTGCCATGGATGATTAATTTTTGTTGCTTTATGACATTTGACGATTTTAGTTGTTGCTAATGGTTACAA TATTTGTTCCAGCTACCTTAGACTACCTCTAGCGTAGCTATCACCATCTTCATTACAGATTTCACAGTTGACAACACCTTTCCGGTGTTTGATTGTGGAT CCCACATAACTATTTTAGTTACTTTTTCTTTTTAAAGGAATTATTTGCAATAAGCTTAAAGCTTTAGCTTAAGAGGGAGTGTTGGAATATATGAAAGTAT CTCACAATATCTTAATTTATCTTATAGAGAATATTTAGATATCAAAAGAATATAATGATTATATCTTAGATTTATTTAGAGTATCTTAGAACTTAGAAGA TCTCTTAAGATTGAGATTACATTATCTTATCTTTTGTGATATGTTTCCTTATTTAATTAGGAGTCTGGATTAATCTAAATAATTGTTAGTGTTATGTCTT TTGAATTACATCATCGTTCACTATAGTATCAATACTATCTACTATTTTGAGCAGTCTTTTTTTTCTTTCTATATCTAAACCCTATAATTTCAACAAGTTA TAATATGTTCTTCGAGCCATGCCTTCAGCCTGCACAATTGTTCTGTTATTTTTGTCATACAAATGGTGGCTCTTTTTCTTGTGTTGTACTTTTTCTCTGT CATTTGGCAGGGGGTGTTGGTATATGCTAAATTACTCATTGCTCATAAAATGATGTCTGAACAGGTGGGTTGAGGAGTATCAGATTGATGGGTTTAGGTT CCATTCTGTTTCATCTATGATATACAGTCACAATGGTTTTGCTACTTTTACTGGTGACTTGGAGGAGTACTGCAACCAATATGTCGACAAGGATGCACTG TTATATCTTATCTTAGCCAATGAGATACTACATTTTTTTTACCCAAATATTATCACAATAGCAGAAGATGCAACATTTTATCCTGGATTATGTGAGCCAG TTTCTCAAGGTGGATTGGGCTTTGATTATTATGTCAACCTTTCTGTGTCTGAGATGTGGTCAACTTTTCTTGAGAGTGTTCCTGATAACGAATGGAGTAT GACTAAGATTGTTAACACATTAGTTTCAAATAGAGAATATGCTGATAAGATGCTTACATATGCTGAAAATTATAACCAGTCCATATCTAGAAGGCGGTCA TTTGCAGAAATATTGTTTGGTGAACTAGATGAGCATTCACACCACTATAAGGAATCTTTGTTGACGGGATCTTCATTACATAAAATGATCAGATTGATCA CGTTAACAATTGGCGGTCGTGCCTATCTGAACTTCATGGGCAATGAATTTGGGCATCCCAAGGGAGTTGAGTTTCCAGCATCAAGCAACAACTTCTCATA TTCGCTTGCTAATCGCCAGTGGGATCTTTTGGGAAAAGAAGTGAACCATGATTTGTTTTCCTTTGATAAGGTCATATCTTACATCAGAGGCCCCCTTCTG TTCATTTTCAATTTTCATCCAACCGATTCTTATGATAGTTACAGAATAGGTGTAGAAGAAGCTGGGGAGTATCAAATTATTCTGAACACAGATGAAATAA AATATGGAGGTCGGGGGAGCATTAAAGAAGACCAGTATCTTCAAAGAACTGTCAACAGAAGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_165708; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_330397
| Blastp | 1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic from Arabidopsis with 67.96% of identity |
|---|---|
| Blastx | 1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic from Arabidopsis with 67.48% of identity |
| Eggnog | Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position (By similarity)(COG0296) |
| Kegg | Link to kegg annotations (AT3G20440) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019440691.1) |
| Pfam | Alpha amylase, C-terminal all-beta domain (PF02806.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |