Ll_transcript_332390

• Id Trinity: TRINITY_DN49001_c0_g1_i2
• Name Transcript: Ll_transcript_332390
• Sequence: GGGTGAATAAGCGGGTTGGGTATGACCTTAAACCTTCTTCAATCATTTGAAAAGACAAATACAAAGGTACCCTAACACACCCTCTCTTCCCTACGTCTCC GCCCTCATCTTTCGTAACCGCCTCACCAGATCTTCAATTTGATTATTTGGGTCGAAGATTGTTGTTGATATAAGTCATGGCAACTAGGCTTCAGTTTGAG AATTCTTGTGAAGTTGGAGTATTTTCTAAACTTACCAATGCCTATTGTTTGGTTGCGATCGGAGGTTCTGAAAACTTCTACAGTGTATTTGAATCTGAGT TAGCTGGTGTTATCCCTGTGATCAAAACATCCATTGGTGGTACTCGTATTATTGGTCGTCTTTGTGCTGGAAACAAAAATGGGCTTCTCTTGCCCCATAC CACCACAGATCAAGAACTTCAACAATTGAGGAACAGTCTACCCGATCAAGTTGTTGTTCAGAGAATAGATGAAAGATTATCTGCTCTGGGAAATTGTATA GCATGTAACGACCATGTGGCCCTCACTCACACTGATCTCGACAGGGAAACTGAGGAGATGATTGCTGATGTTCTTGGAGTAGAAGTTTTCAGGCAGACCA TTGCCGGTAATATCCTCGTTGGTAGTTTCTGTGCCTTCTCCAATAGAGGTGGTTTGGTCCACCCCCATACTTCCATAGAAGACTTGGACGAGCTTTCAAC GCTTCTTCAAGTTCCATTGGTGGCTGGGACTGTGAACCGTGGTAGCGAAGTAATAGCTGCCGGAATGACAGTCAATGATTGGACAGCATTTTGTGGTTCA GACACCACAGCAACAGAGCTTTCAGTGATCGAGAGTGTTTTCAAGCTGAGGGAAGCACAGCCTAGTGCTATTGTGGATGAGATGAGGAAATCACTCATTG ATAGCTATGTCTGAATACTGGTGATAGAATTGTCTTCTCTTTTGGATATACATTATTATTACTTCTTATTGTTAAGATCTTTTAAGCTTTGGTGATTGTT TTGTCGTATACATTGTGGATACATATATTCCAGTCATGACATTAAGTTTGATATGACTTAATATTATATGAAGCTACTGTTGAGTTACATGGACTGGTTT GTTGAAATTGATTCATTGATTTTGAGGGTTGATTTGGATAGTTGGAGACGTCTTATAACATGAATTTAATTTAATATGTTTACACTGAC
• Tissue: pods
• Gene name: LI_gene_165711;
• Additional information: details;

Expression of Ll_transcript_332390

FPKM

• PAB: 96.7
• PNAB: 68.9
• PS1: 50.6
• PS2: 41.8
• PS3: 61
• PW1: 50
• PW2: 63.7
• PW3: 55.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_332390

• Blastp: Eukaryotic translation initiation factor 6-2 from Arabidopsis with 91.02% of identity
• Blastx: Eukaryotic translation initiation factor 6-2 from Arabidopsis with 90.98% of identity
• Eggnog: Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm(COG1976)
• Kegg: Link to kegg annotations (AT3G55620)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_014624279.1)
• Pfam: eIF-6 family (PF01912.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;