| Id Trinity | TRINITY_DN49001_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_332392 |
| Sequence | GGGTGAATAAGCGGGTTGGGTATGACCTTAAACCTTCTTCAATCATTTGAAAAGACAAATACAAAGGTACCCTAACACACCCTCTCTTCCCTACGTCTCC GCCCTCATCTTTCGTAACCGCCTCACCAGGTACTCTTTTCTTTATCATTATGGCCTCACCTTCATATCAATGAAATTTCCCCAATTTATTTTTTATTTTT TATTTTCTCATTCGGGATTTCTAATTTTACTGTTGAGCTTAAATTATTCATATCAAGCATGCTGTTACAAACACATATAAAATATATGATTATCAACATG TCTTGGAGATGCCAGTGCTGTTATTGGATTTTCTTCTCATGAAGATCTTCAATTTGATTATTTGGGTCGAAGATTGTTGTTGATATAAGTCATGGCAACT AGGCTTCAGTTTGAGAATTCTTGTGAAGTTGGAGTATTTTCTAAACTTACCAATGCCTATTGTTTGGTTGCGATCGGAGGTTCTGAAAACTTCTACAGTG TATTTGAATCTGAGTTAGCTGGTGTTATCCCTGTGATCAAAACATCCATTGGTGGTACTCGTATTATTGGTCGTCTTTGTGCTGGAAACAAAAATGGGCT TCTCTTGCCCCATACCACCACAGATCAAGAACTTCAACAATTGAGGAACAGTCTACCCGATCAAGTTGTTGTTCAGAGAATAGATGAAAGATTATCTGCT CTGGGAAATTGTATAGCATGTAACGACCATGTGGCCCTCACTCACACTGATCTCGACAGGGAAACTGAGGAGATGATTGCTGATGTTCTTGGAGTAGAAG TTTTCAGGCAGACCATTGCCGGTAATATCCTCGTTGGTAGTTTCTGTGCCTTCTCCAATAGAGGTGGTTTGGTCCACCCCCATACTTCCATAGAAGACTT GGACGAGCTTTCAACGCTTCTTCAAGTTCCATTGGTGGCTGGGACTGTGAACCGTGGTAGCGAAGTAATAGCTGCCGGAATGACAGTCAATGATTGGACA GCATTTTGTGGTTCAGACACCACAGC BLAST |
| Tissue | pods |
| Gene name | LI_gene_165711; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_332392
| Blastp | Eukaryotic translation initiation factor 6-2 from Arabidopsis with 91.47% of identity |
|---|---|
| Blastx | Eukaryotic translation initiation factor 6-2 from Arabidopsis with 91.47% of identity |
| Eggnog | Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm(COG1976) |
| Kegg | Link to kegg annotations (AT3G55620) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_014624279.1) |
| Pfam | eIF-6 family (PF01912.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |