Ll_transcript_332389

• Id Trinity: TRINITY_DN49001_c0_g2_i1
• Name Transcript: Ll_transcript_332389
• Sequence: TAACCTTTTCCATATTTCGCTCTCCCACTATTCTTAGCTTTATTCACCTCTTCCGCCGCTCTCTTCTTTTCTGGTATCTATTACTGCAGATATTAAGTTG ATTACTTGGCTCAAAGAATTGTCTTAGCACTCATGGCAACTAGACTTCAGTTTGAGAACTCTTGTGAAGTTGGAGTGTTTTCTAAACTCACCAATGCCTA TTGTTTGGTTGCTATTGGAGGTTCCGAAAACTTCTACAGTACATTTGAGGCTGAGTTAGCAGATGTTATCCCTATTGTCAAAACCTCTATTGGTGGCACT CGAATTATTGGTCGTCTTTGTGTTGGTAAAGTTTTGCTCTGGATGTTTATATTTTTACTGAGTATGATTCCTTGCTTTGGAGTGTGGATATTATCCGTTG TTAAGAAATAAGAGATGGTTCCGCCCTCTCCCTTTCTCTGTCAGTGACATTAACAGATGTTATTGTTTTAGTAAAACAAGGAGATTGTAGTCTCAGTCTC TCCGATTTATTTATTTATCATTACTGGGACCTTATTAATTTACTCTATTGTATTGCAGGAAATAAGAATGGTCTTCTCTTGCCCCATACCACCACAGACC AAGAACTTCAACATTTGAGGAACAGTCTACCTGATCAAGTTGTTGTTCAGCGCATAGACGAAAGACTTTCTGCTCTGGGAAATTGTATAGCATGTAATGA CCATGTGGCCCTCACGCACACCGATCTTGACAGGGAAACTGAAGAAATGATCGCAGATGTTCTCGGGGTAGAAGTCTTCAGGCAAACTGTTGCGGGTAAT ATTCTCGTCGGCAGTTACTGTGCATTCTCCAACAGAGGTGGTTTGGTTCACCCTCATACTTCCATAGAAGACTTGGATGAACTTTCTACACTTCTTCAAG TTCCTTTGGTGGCTGGGACCGTCAACCGTGGCAGTGAAGTTATAGCGGCCGGAATGACGGTAAATGATTGGACAGCCTTTTGTGGTTCCGACACCACAGC AACAGAGCTCTCTGTGATAGAGAGTGTTTTCAAGCTGAGGGAAGCCCAGCCAAGTGCCATTGTGGATGAGATGAGAAAATCACTCATTGATAGCTATGTC TGAGTTTTGGTGATGATAGTATTCAATCTTCATACTATGATGTACTGTTTATTTTTAAGCTCAAGTTTTCATGATAGTTTTTTCGTTTTTCCTTTTGGTA AAAAACAATTTTGGTAATATTTTGTCTTTTAAAATACGAGAACACAAATTTTAGACAGTTGTAGTTTTCATGAGTTGTGTGTGATATATTTTTTTGGAGG AGTTTTTGGGTTGCATTCGTAGATGTCTGGGTAAGAAAAGATAACATTGGAAAATTATTGATTTGTCATATGCATAAATCAAAGGAGAAACATG
• Tissue: pods
• Gene name: LI_gene_165712;
• Additional information: details;

Expression of Ll_transcript_332389

FPKM

• PAB: 3.4
• PNAB: 8.6
• PS1: 4.5
• PS2: 6.8
• PS3: 6.7
• PW1: 3.6
• PW2: 5
• PW3: 3.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_332389

• Blastp: Eukaryotic translation initiation factor 6-2 from Arabidopsis with 89.83% of identity
• Blastx: Eukaryotic translation initiation factor 6-2 from Arabidopsis with 91.21% of identity
• Eggnog: Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm(COG1976)
• Kegg: Link to kegg annotations (AT3G55620)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_020239577.1)
• Pfam: eIF-6 family (PF01912.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;