Ll_transcript_331553

• Id Trinity: TRINITY_DN49003_c0_g1_i1
• Name Transcript: Ll_transcript_331553
• Sequence: CTTCATTTATTATTTCCTATGTAATTTTTATATCATAAATATTTAAAATTGGAATTTATTGCCCCAATGAAGCATAGCCTAAACCAAAACCAAGTGAATT TGAGGTCTCACTTCACAATTGGCATCCCCTCAAATCCATGGCCACCGTTTCTGGTTCAAGGACAATCCTCTTCTCCCATTCCTCCAAGCTCTTTTTCCTT CCTTTCAAACCTTCTCCCTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCCATCTACCCTTCTCTCTTTCTCTCCGTTTCACTCGACCCACTTGCACTC TCAATCTCTCACCCTCTCCCTCCGACCCACAACACCAACACCAACAACTTCATCAGAATCCTCGCAATGTAATTCAAATCCTCGAAGAAAGGGGCCTCCT TGATTCCCTTACCAGCGATGCTCTCAGAAACATTTCATCAAACAGCATTGGTGCAACTCCACCCCTCAAAGTCTACTGCGGTTTCGACCCAACCGCCGAG AGCTTACACCTTGGCAACCTCCTCGGCATTATTGTCCTCTCGTGGTTCCGCCGCTGCGGCCATAAACCTGTCGCCTTGATTGGTGGTGCCACTGCCCGGA TTGGAGACCCATCAGGGAAGAGTGTTGAAAGACCTGAACTTGATGTTGATACTTTGGAGAGAAATGCTGCAGGTATTTCTAGCATCATTGTTAGAATCTT GGGCCGTGCTCAAAATCAAAACTTGGGTGCTGATGATGATAATTCTGTTGTGGTATTGAATAACTATGATTGGTGGAAGGAGTTTAGTTTGTTGGATTTT TTGAAAAATGTGGGTAGGTATGCTCGTGTGGGTACAATGATGGCGAAGGAAAGTGTGAGAAAGAGGTTGGAATCGGAACAAGGGATGAGTTTCACTGAAT TCACTTATCAGTTGTTGCAGGGTTATGATTTTTTGTACTTGTATCAGAATGAGGGCGTGAGGGTTCAAATTGGGGGTAGTGATCAATGGGGTAATATAAC TGCTGGAACTGATTTGATTAGGAAGATATTACAGGTGGATGGTGCTGCATATGGCTTGACATTTCCACTTTTATTGAAGAGTGATGGCACTAAGTTTGGT AAATCGGAGGATGGTGCAATTTGGTTATCGCCAACCTTACTATCTCCATACAAGTTTTACCAGTATTTTTTCTCTGTTCCGGATGATGATGTGATTAGGT TTTTGAAAATTCTTACTTTTTTGGATATTGAAGAGATAGCTCAGTTGGAGGGTGAGATGATTAAACCTGGGTATGTGCCTAATACTGCCCAGCGGAGGCT TGCCGAAGAAGTTACCCGATTCGTTCATGGGGAAGATGGTTTGAGTGAGGCTCTTAGGGCAACTGAAGCACTGAGGCCTGGATCTGAGACAAAGTTGGAC TGGAAAACAATTGAGGGGATCGCTGAGGATGTCCCATCTTGTTCTTTGGCTTATGATGAGGTTTTGAATCAGTCATTGGTTGATCTTTCTGTTTCTTCTG GCTTGTTTGACAGCAAATCTGCTGCGCGCCGTTTGTTGAAGCAAGGAGGTGTTTACTTGAATAATTGCAGAGTAAATAGTGAAAATAAAAGGATTGAGGT AGAAGATATTGTGGATGGGAAAGTTCTCCTTTTATCTGCAGGCAAAAAGAATAAGGTGTTGGTGCGAATTGCATGACAGAATTTATCACATAGCTGAATA TTAATATTATTTGTAAACTGCTTTATTTATTCTGTAAGTTTGTTGTATGCTTAGTTTCCTTTGATTTTTTGGTGCTACATAAAAACTTCAAAGTTACTAA TGAAATAAATATGGTTATTGGTTAACTAATTTGGCATTTGTTAGGTGTTCCAAGTCCAACTTCAATGATATTGATAATTTGATATCCTAAAA
• Tissue: pods
• Gene name: LI_gene_165730;
• Additional information: details;

Expression of Ll_transcript_331553

FPKM

• PAB: 1.9
• PNAB: 5.7
• PS1: 4.4
• PS2: 2.2
• PS3: 3.8
• PW1: 4.1
• PW2: 3
• PW3: 2.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_331553

• Blastp: Tyrosine--tRNA ligase, chloroplastic/mitochondrial from Arabidopsis with 71.74% of identity
• Blastx: Tyrosine--tRNA ligase, chloroplastic/mitochondrial from Arabidopsis with 74.77% of identity
• Eggnog: Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) (By similarity)(COG0162)
• Kegg: Link to kegg annotations (AT3G02660)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019439601.1)
• Pfam: tRNA synthetases class I (W and Y) (PF00579.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;